ggKbase home page

scnpilot_p_inoc_scaffold_28555_4

Organism: SCNpilot_P_inoc_Thiobacillus_fragments_65_690_partial

partial RP 14 / 55 BSCG 11 / 51 MC: 2 ASCG 4 / 38
Location: 2419..2778

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C509D similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 233
  • Evalue 1.10e-58
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 119.0
  • Bit_score: 232
  • Evalue 4.30e-58
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 119.0
  • Bit_score: 230
  • Evalue 1.90e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGCCACGCGTCAAACGGGGTGTAACCGCCCGCGCCAGCCACAAGAAAATCCTCGATGCCGCCAAGGGCTATCGCGGTCGTCGCAAGAACGTATTCCGCGTCGCCAATGAAGCGGTGATGAAGGCCGGTCAGTACCAGTACCGCGACCGTCGTCAGCGCAAGCGCCAGTTCCGCGCCCTGTGGATTGCCCGTATCAACGCCGCCTCGCGGCAGCACGGTCTGACCTACAGCGTGTTCATGAACGGTTTGAGCCGCGCCGAGATCGGGATCGACCGCAAGGTGCTGTCCGATATCGCGATTTTCGACAAGGACGCCTTTGCCAAGATCGTTGAACAGGTCAAGGCCAAGCTGGCGGCGTAA
PROTEIN sequence
Length: 120
MPRVKRGVTARASHKKILDAAKGYRGRRKNVFRVANEAVMKAGQYQYRDRRQRKRQFRALWIARINAASRQHGLTYSVFMNGLSRAEIGIDRKVLSDIAIFDKDAFAKIVEQVKAKLAA*