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scnpilot_p_inoc_scaffold_26616_3

Organism: SCNpilot_P_inoc_Thiobacillus_fragments_65_690_partial

partial RP 14 / 55 BSCG 11 / 51 MC: 2 ASCG 4 / 38
Location: comp(2168..2266)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Thiobacillus RepID=UPI00037A4DDE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 32.0
  • Bit_score: 65
  • Evalue 1.10e-08
RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 32.0
  • Bit_score: 65
  • Evalue 2.90e-09
RNA-binding protein Hfq {ECO:0000255|HAMAP-Rule:MF_00436}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacill similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 32.0
  • Bit_score: 65
  • Evalue 1.40e-08

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 99
GGCCAGGACCAGGCCGCGCAGATGATCTTCAAGCACGCCATCTCGACCATTTCGCCCTCGCGCGAAGTGGTGCTGCCGCAGCGCGACGCCGAGGCCTGA
PROTEIN sequence
Length: 33
GQDQAAQMIFKHAISTISPSREVVLPQRDAEA*