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scnpilot_p_inoc_scaffold_30092_4

Organism: SCNpilot_P_inoc_Thiobacillus_fragments_65_690_partial

partial RP 14 / 55 BSCG 11 / 51 MC: 2 ASCG 4 / 38
Location: 2832..3287

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82WG3_NITEU similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 152.0
  • Bit_score: 204
  • Evalue 8.80e-50
cold shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 152.0
  • Bit_score: 202
  • Evalue 7.20e-50
Cold-shock DNA-binding domain {ECO:0000313|EMBL:CAD84628.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomon similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 152.0
  • Bit_score: 202
  • Evalue 3.60e-49

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Taxonomy

Nitrosomonas europaea → Nitrosomonas → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
GTGCGCTATCAGGGAAAAATTACTGACTGGAAGGATGACAAGGGATTCGGATTCATCACGCCAAACGATGGTAACCAACGCGTCTTCGTTCATATCAAGTCATTCTCGAGCCGGCAGCAACGGCCTGTAGGAAATGAAATCGTGACCTACGAACTCCGGCACGATGCCAAGGGTCGGCCGCAAGCCGAACGCATCGCCTTCGTCGGCAAGCGGGGAGCCCCGGCCAGCCCGTCCGGCCAGGACAATGCGCCGCTCATTCTGACTGCGGCGTTTCTTGTCTTTGTCGCGGGATCGGTCTTTGCCGGGAGATTGCCGATTGCAGTCGCAGGACTCTATATGGTTGCCAGCCTTGTCGCATTTATCGCGTATGCGCTCGACAAGTCGGCTGCAAGAAACGACCAGTGGCGCACCCAGGAAAGCACCCTGCATCTTTTTGCTCTGGCAGGTGGCTGGCCG
PROTEIN sequence
Length: 152
VRYQGKITDWKDDKGFGFITPNDGNQRVFVHIKSFSSRQQRPVGNEIVTYELRHDAKGRPQAERIAFVGKRGAPASPSGQDNAPLILTAAFLVFVAGSVFAGRLPIAVAGLYMVASLVAFIAYALDKSAARNDQWRTQESTLHLFALAGGWP