ggKbase home page

scnpilot_p_inoc_scaffold_41215_1

Organism: SCNpilot_P_inoc_Thiobacillus_fragments_65_690_partial

partial RP 14 / 55 BSCG 11 / 51 MC: 2 ASCG 4 / 38
Location: comp(90..1388)

Top 3 Functional Annotations

Value Algorithm Source
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-); K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 432.0
  • Bit_score: 777
  • Evalue 7.70e-222
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 432.0
  • Bit_score: 767
  • Evalue 1.60e-219
23S rRNA methyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000366F57E similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 432.0
  • Bit_score: 827
  • Evalue 4.60e-237
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1299
ATGAACCCCGTCGTCGACATCCTCTCCCTCGACCACGAGGGCCATGGCGTGGCGCGCCTCGACGGCAAGGTCACCTTCGTCGACGGTGCCCTGGCGGGCGAACGCGCGGAAATCGCGGTCTACCGCAAGCATGCCAAATACAATTCGGCCAACGCGGTCGCCATCCTGAAATCCAGCGCCCAGCGCGCCGAGCCGCGCTGCCGCTACTTCGGCCGCTGCGGCGGCTGCTCGATGCAGCATCTGGAGGCCAGCGCCCAGGTCGCCGCCAAGCAGCGCGTGCTGGAAGAGAATCTCGCCCGCATCGGCAAGGTCCGCCCCGACGTCATCCTGCCCCCCCTGCACGGCCCCAGCTGGGGCTATCGCCACCGCGCCCGGCTATCGTCGCGCTGGGTCGACAAGAAAGGCGGCGTGCTGGTCGGCTTCCACGAAAAACGCTCCAGCTTCATTGCCGACATGGCAAGCTGCGAGATCCTCACGCCCGATGTCTCGGCGCTGATCCAGCCGCTGCGCGAGTTGATCGTGCAGTTGTCGAACGCCGACCGCACCCCGCAGATCGAGGTCGCCGTCGGCGAACACGTCACCGTGCTGGTGTTCCGCCTGCTTGAGCCATGGAGCGACGAGGACGCCGCCAAAGTGCGCAGCTTCGCCGAGCGCCACCGCGTGCAGGTGTGGGAGCAGAAAAAAGGCCCCGACACCGCGCGTCCTTTCTGGCCGGAAATTGCGCCTGAACTCAGCTACAGCCTGCCGGAGTTCGGCCTCGTCATGCCTTTCAGGCCGACCGAATTCACCCAGGTCAACACCGCCATCAATCGCGCCCTGGTCAGCCGCGCAATGCGCCTGCTGCAGCCCCAGGCCGGCGAGCGCATCGCGGACCTGTTCTGCGGCCTGGGCAACTTCACCCTGCCGATCGCCGGCAGCGGCGCCGAGGTGCTCGGCATCGAAGGGAGCGCCGAACTGGTTGCCCGCGCGCGCGAAAACGCCCTGCGCAACCGCCTGCCCAACGCCCGCTTCACGGTCGACAACCTGTTCGAGATGACGCCGGAAAAATTCGCCGCCCTCGGGCATTTCGACAAATTGCTGATCGATCCGCCGCGTTCTGGTGCCATCGAGGTCGTCAAATCCCTGCCCGACAACGGCGGGCCGCAGCGCATCGTCTACGTCTCGTGCGATCCCGCCACGCTGGCGCGCGATGCCGAGGTGCTGGTGCACGTCAAGGGCTACCGGCTCGAAGCGGCAGGCGTCGCCAACATGTTCCCGCACACCGCGCACGTGGAGTCGATTGCGCTTTTCCAGCGCTAA
PROTEIN sequence
Length: 433
MNPVVDILSLDHEGHGVARLDGKVTFVDGALAGERAEIAVYRKHAKYNSANAVAILKSSAQRAEPRCRYFGRCGGCSMQHLEASAQVAAKQRVLEENLARIGKVRPDVILPPLHGPSWGYRHRARLSSRWVDKKGGVLVGFHEKRSSFIADMASCEILTPDVSALIQPLRELIVQLSNADRTPQIEVAVGEHVTVLVFRLLEPWSDEDAAKVRSFAERHRVQVWEQKKGPDTARPFWPEIAPELSYSLPEFGLVMPFRPTEFTQVNTAINRALVSRAMRLLQPQAGERIADLFCGLGNFTLPIAGSGAEVLGIEGSAELVARARENALRNRLPNARFTVDNLFEMTPEKFAALGHFDKLLIDPPRSGAIEVVKSLPDNGGPQRIVYVSCDPATLARDAEVLVHVKGYRLEAAGVANMFPHTAHVESIALFQR*