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scnpilot_p_inoc_scaffold_46164_1

Organism: SCNpilot_P_inoc_Thiobacillus_fragments_65_690_partial

partial RP 14 / 55 BSCG 11 / 51 MC: 2 ASCG 4 / 38
Location: 2..643

Top 3 Functional Annotations

Value Algorithm Source
Membrane lipoprotein lipid attachment site id=1311305 bin=GWE1_T_denit_62_9 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 208.0
  • Bit_score: 404
  • Evalue 6.20e-110
  • rbh
membrane lipoprotein lipid attachment site; K12061 conjugal transfer pilus assembly protein TraW Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 207.0
  • Bit_score: 404
  • Evalue 8.70e-110
IncF plasmid conjugative transfer pilus assembly protein TraW similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 190.0
  • Bit_score: 185
  • Evalue 1.30e-44

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
CGATCCCGCTGTTTTGACATGATCAAGAAGGTTCTGGCGATGATTCTGTGTGGGTTGATCATGTATCCGGCCTGGGCTCAGGAGATTTTGGGGCCGTCCTATCCCATCACCGAACCGGACATGCTTGAAGCGATACAGGACAAGCTCAAGTCCATGGAAAAAAACGGTCGTCTGGGCCAGCTCCAGAAAGAAGCCATCGAGCGATCGAAACAAAGCATCGAGCGGCCGGACCCAGTGAAGGGCGTCGTCAAGACGCGTCAGCCGCGTACCTTCTACTTTGATCCTTCCTGGCGCGTCCCGCGTGACATCACCACGCCAGAAGGCGAAGTCATCGCGCGTGCGGGTGACATGGTCAACCCGCTCGACTATGTGCCCCTCTCCAATCACCTGTTCTTTTTCGATCAGAGCGACCCGAAGCAGGTAAAGAAAGCCGCCGAGATTCTCAAGCGATTCAACGGAGCGGTGAAGCCGATTCTGGTCGCGGGTGAACCCTTGGTGCTGACCCGTCAGTGGAAACGGCAGGTGTACTTCGACCAGAGCGGGCATCTGGTCATGCGCTTCGGGATCAAGCAGGTTCCTGCACTGGTGTCGCAAGACCTAGCGCAAAGGCGCTTGCGCATCGACGAAATAAAAGCTGACTAA
PROTEIN sequence
Length: 214
RSRCFDMIKKVLAMILCGLIMYPAWAQEILGPSYPITEPDMLEAIQDKLKSMEKNGRLGQLQKEAIERSKQSIERPDPVKGVVKTRQPRTFYFDPSWRVPRDITTPEGEVIARAGDMVNPLDYVPLSNHLFFFDQSDPKQVKKAAEILKRFNGAVKPILVAGEPLVLTRQWKRQVYFDQSGHLVMRFGIKQVPALVSQDLAQRRLRIDEIKAD*