ggKbase home page

scnpilot_p_inoc_scaffold_66673_1

Organism: SCNpilot_P_inoc_Thiobacillus_fragments_65_690_partial

partial RP 14 / 55 BSCG 11 / 51 MC: 2 ASCG 4 / 38
Location: 2..688

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase A (EC:5.4.99.-); K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 213.0
  • Bit_score: 338
  • Evalue 8.20e-90
ribosomal large subunit pseudouridine synthase A (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 211.0
  • Bit_score: 312
  • Evalue 9.70e-83
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003805446 similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 212.0
  • Bit_score: 375
  • Evalue 3.30e-101
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
GCGTTTCCAGATGTCAAAATTACCGACATGCCTCATTCCGATCCGTCCGACGCCATCGAACGCCTTTATGTCGATGACACCCTGCTGGTACTCGACAAGCCGAGCGGTCTGCTCGCGGTTCCCGGGCGCGGCGCCGACAAGCAGGATTGCCTCGCCGCGCGGGTGCAGGCCCGCTATCCCGGTGCCCTCATCGTGCACCGGCTCGACATGGCCACTTCCGGGCTGATGGTGATGGCGCGCAACCCGGCAGCGCAGCGCGAACTGAGCAAGGCGTTCGCCGCGCGCGAGGTGACGAAGCGCTACATCGCGGTGGTGGCCGGGCGGTTGGACGCGCCGCCGGAGGACTGGGGAATCATCGATATGCCGATCGTCGTCGACTGGCCCAGACGGCCGTTGCGGATCGTCGATCCGGTTCACGGCAAACCCAGCCTCACCCGCTGGCGCGTGCTGGAATGCGACGCGACCGGCCAGGGCACGCGCGTGGAACTCGAACCGGTCACGGGCCGTTCGCATCAGTTGCGCGTTCATCTGCGTGAATTGGGTCACCCCATCCTGGGCGATGCGCTGTATGCGCCGTCCGAGGTGCAGGCCCGAGCCGGGCGCCTGTTGCTGCACGCCTGGTCGCTGCGTTTCGCGCATCCGTTGACGGGGGACGCGCTTGCGTTCGAGAGCCCGGCGCCGTTTTGA
PROTEIN sequence
Length: 229
AFPDVKITDMPHSDPSDAIERLYVDDTLLVLDKPSGLLAVPGRGADKQDCLAARVQARYPGALIVHRLDMATSGLMVMARNPAAQRELSKAFAAREVTKRYIAVVAGRLDAPPEDWGIIDMPIVVDWPRRPLRIVDPVHGKPSLTRWRVLECDATGQGTRVELEPVTGRSHQLRVHLRELGHPILGDALYAPSEVQARAGRLLLHAWSLRFAHPLTGDALAFESPAPF*