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scnpilot_p_inoc_scaffold_65073_1

Organism: SCNpilot_P_inoc_Thiobacillus_fragments_65_690_partial

partial RP 14 / 55 BSCG 11 / 51 MC: 2 ASCG 4 / 38
Location: 2..559

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 185.0
  • Bit_score: 349
  • Evalue 4.50e-94
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenoph similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 185.0
  • Bit_score: 349
  • Evalue 2.20e-93
ribosomal large subunit pseudouridine synthase D n=1 Tax=Thiobacillus denitrificans RepID=UPI00036DBFC1 similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 185.0
  • Bit_score: 366
  • Evalue 2.10e-98

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
GCCGAGCTGCCGCGCGCCGGCATCGTGCACCGGCTCGACAAGGATACCTCCGGCCTGCTGGTCGTCGCCAAAACCCTGCAAGCCCATACCGACCTGGTGCGCCAACTGCAGGCGCGCACTGTCAAGCGCGAATACCTCGCCCTGGTGTATGGAGAGGTCGACCACGCGGGCACCGTCGATATGCCGCTGGCGCGCGATCCGCACAACCGCACCAAGCGTACCGTGCACAGCATGGGCAAGCAGGCGGTCACGCATTACGACGTGGTCGAACGCTTCCCCGGCGTGACGCTGCTGCGCTGCCGGCTCGAAACCGGCCGCACCCACCAGATCCGGGTCCACATGCAGCACATCGGCCACCCGTTGGTCGGCGAACAGGTCTACAGCGCCAGCCGCCGCAGTCATCTCAAGATTCCGTTCCCGCGCCAGGCGCTGCACGCCGAGCGACTGGGCCTGATCCACCCGATCACCCAGGAATTCATGCAGTGGGAGTGTCCGCTGCCGCCCGACTTCGCCTCGCTGCTGCAGGCGCTGCGCGACAACACCGGCTGGGGCAAATGA
PROTEIN sequence
Length: 186
AELPRAGIVHRLDKDTSGLLVVAKTLQAHTDLVRQLQARTVKREYLALVYGEVDHAGTVDMPLARDPHNRTKRTVHSMGKQAVTHYDVVERFPGVTLLRCRLETGRTHQIRVHMQHIGHPLVGEQVYSASRRSHLKIPFPRQALHAERLGLIHPITQEFMQWECPLPPDFASLLQALRDNTGWGK*