ggKbase home page

scnpilot_p_inoc_scaffold_69755_1

Organism: SCNpilot_P_inoc_Thiobacillus_fragments_65_690_partial

partial RP 14 / 55 BSCG 11 / 51 MC: 2 ASCG 4 / 38
Location: 1..183

Top 3 Functional Annotations

Value Algorithm Source
rpmB; 50S ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 60.0
  • Bit_score: 123
  • Evalue 1.70e-26
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 id=12494059 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 61.0
  • Bit_score: 123
  • Evalue 6.10e-26
50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 60.0
  • Bit_score: 123
  • Evalue 8.40e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 183
TCCCACGCCAACAATAAAACCAAGCGTCGTTTCCTGCCCAACCTGCAATACCGCCGGTTCTGGGTCGAAAGCGAAAACCGCTGGGTTCGTCTGCGTCTGTCCAATGCTGCCCTGCGCACTATCGACAAGAACGGCATCGAATCCGTCCTGGCCGACCTGCGCGCCCGCGGCGAAGCAGTTTAA
PROTEIN sequence
Length: 61
SHANNKTKRRFLPNLQYRRFWVESENRWVRLRLSNAALRTIDKNGIESVLADLRARGEAV*