Consensus taxonomy: Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria
not a true bin, the Thiobacillus are fragmented. Subassemblies needed.
contig | # features | sequence size | GC content (%) | Cov | Coding Density (%) | |
---|---|---|---|---|---|---|
scnpilot_p_inoc_scaffold_51393
Species:
R_Betaproteobacteria_61_14 (50%)
|
2 | 1339 bp | 64.45 | 811.73 | 93.88 | |
scnpilot_p_inoc_scaffold_122518
Species:
GWE1_Thiobacillus_62_9_curated (100%)
|
2 | 1014 bp | 64.79 | 546.75 | 86.69 | |
scnpilot_p_inoc_scaffold_90114
Species:
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
|
2 | 1437 bp | 69.80 | 743.84 | 100.21 | |
scnpilot_p_inoc_scaffold_68224
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
|
2 | 1072 bp | 66.51 | 635.68 | 86.47 | |
scnpilot_p_inoc_scaffold_63593
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
|
2 | 1132 bp | 69.17 | 793.20 | 99.38 | |
scnpilot_p_inoc_scaffold_52818
Species:
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
|
2 | 1529 bp | 64.55 | 622.37 | 92.22 | |
scnpilot_p_inoc_scaffold_64571
Species:
GWE1_Thiobacillus_62_9_curated (50%)
|
2 | 1370 bp | 64.67 | 557.63 | 58.03 | |
scnpilot_p_inoc_scaffold_124786
Species:
GWE1_Thiobacillus_62_9_curated (50%)
|
2 | 1124 bp | 67.44 | 522.20 | 99.82 | |
scnpilot_p_inoc_scaffold_72560
Species:
GWE1_Thiobacillus_62_9_curated (100%)
|
2 | 1859 bp | 64.39 | 673.67 | 92.47 | |
scnpilot_p_inoc_scaffold_91266
Species:
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
|
2 | 1411 bp | 64.56 | 505.71 | 102.48 | |
scnpilot_p_inoc_scaffold_40308
Species:
Thiobacillus denitrificans (50%)
|
2 | 1626 bp | 72.94 | 786.53 | 97.05 | |
scnpilot_p_inoc_scaffold_125526
Species:
GWE1_Thiobacillus_62_9_curated (50%)
|
2 | 1442 bp | 65.88 | 678.43 | 97.16 | |
scnpilot_p_inoc_scaffold_63349
Species:
Thiobacillus denitrificans (50%)
|
2 | 1136 bp | 69.54 | 772.32 | 96.39 | |
scnpilot_p_inoc_scaffold_126145
Species:
Hyphomicrobium denitrificans (50%)
|
2 | 1627 bp | 63.18 | 646.56 | 102.15 | |
scnpilot_p_inoc_scaffold_28145
Species:
Thiobacillus denitrificans (100%)
|
2 | 2169 bp | 66.62 | 752.90 | 99.31 | |
scnpilot_p_inoc_scaffold_57261
Species:
GWE1_Thiobacillus_62_9_curated (50%)
|
2 | 1229 bp | 62.65 | 730.11 | 92.51 | |
scnpilot_p_inoc_scaffold_57520
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
|
2 | 1225 bp | 69.31 | 692.57 | 100.16 | |
scnpilot_p_inoc_scaffold_72834
Species:
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
|
2 | 1019 bp | 64.38 | 756.92 | 85.38 | |
scnpilot_p_inoc_scaffold_70299
Species:
Thiobacillus denitrificans (50%)
|
2 | 1048 bp | 63.84 | 682.16 | 99.62 | |
scnpilot_p_inoc_scaffold_68764
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
|
2 | 1066 bp | 64.54 | 678.94 | 91.74 | |
scnpilot_p_inoc_scaffold_130472
Species:
Thiobacillus denitrificans (100%)
|
2 | 1001 bp | 68.53 | 592.66 | 76.12 | |
scnpilot_p_inoc_scaffold_56923
Species:
GWE1_Thiobacillus_62_9_curated (100%)
|
2 | 1235 bp | 64.94 | 723.28 | 97.17 | |
scnpilot_p_inoc_scaffold_47548
Species:
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
|
2 | 1426 bp | 68.72 | 697.41 | 97.62 | |
scnpilot_p_inoc_scaffold_59463
Species:
Thiobacillus denitrificans (50%)
|
2 | 1193 bp | 73.18 | 671.79 | 100.34 | |
scnpilot_p_inoc_scaffold_37410
Species:
GWE1_Thiobacillus_62_9_curated (50%)
|
2 | 1726 bp | 63.85 | 803.27 | 97.33 | |
scnpilot_p_inoc_scaffold_94384
Species:
GWE1_Thiobacillus_62_9_curated (50%)
|
2 | 1274 bp | 63.50 | 671.70 | 90.66 | |
scnpilot_p_inoc_scaffold_67451
Species:
Thiobacillus denitrificans (50%)
|
2 | 1081 bp | 64.57 | 768.32 | 99.91 | |
scnpilot_p_inoc_scaffold_48068
Species:
GWE1_Thiobacillus_62_9_curated (100%)
|
2 | 1413 bp | 63.55 | 590.98 | 100.21 | |
scnpilot_p_inoc_scaffold_70828
Species:
Janthinobacterium sp. Marseille (50%)
|
2 | 1286 bp | 63.84 | 526.75 | 87.95 | |
scnpilot_p_inoc_scaffold_71293
Species:
GWE1_Thiobacillus_62_9_curated (50%)
|
2 | 1736 bp | 61.75 | 652.71 | 92.63 | |
scnpilot_p_inoc_scaffold_66997
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
|
3 | 1087 bp | 61.55 | 650.09 | 75.62 | |
scnpilot_p_inoc_scaffold_75327
Genus:
Sulfuricella (66.67%)
|
3 | 1408 bp | 71.38 | 567.51 | 92.90 | |
scnpilot_p_inoc_scaffold_95357
Class:
Betaproteobacteria (66.67%)
|
3 | 2029 bp | 69.00 | 571.32 | 58.99 | |
scnpilot_p_inoc_scaffold_50411
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
|
3 | 2552 bp | 66.34 | 788.79 | 79.82 | |
scnpilot_p_inoc_scaffold_75490
Order:
Hydrogenophilales (66.67%)
|
3 | 1267 bp | 59.35 | 717.32 | 87.13 | |
scnpilot_p_inoc_scaffold_73686
Order:
Hydrogenophilales (100%)
|
3 | 1805 bp | 66.43 | 570.91 | 95.57 | |
scnpilot_p_inoc_scaffold_52367
Species:
GWE1_Thiobacillus_62_9_curated (66.67%)
|
3 | 1788 bp | 67.00 | 772.73 | 100.34 | |
scnpilot_p_inoc_scaffold_75564
Order:
Hydrogenophilales (100%)
|
3 | 1630 bp | 62.21 | 666.53 | 91.66 | |
scnpilot_p_inoc_scaffold_61963
Species:
GWE1_Thiobacillus_62_9_curated (66.67%)
|
3 | 1155 bp | 62.25 | 687.14 | 80.52 | |
scnpilot_p_inoc_scaffold_65523
Species:
GWE1_Thiobacillus_62_9_curated (66.67%)
|
3 | 1776 bp | 67.34 | 511.40 | 88.85 | |
scnpilot_p_inoc_scaffold_158771
Phylum:
Proteobacteria (100%)
|
3 | 1153 bp | 65.48 | 590.76 | 86.38 | |
scnpilot_p_inoc_scaffold_50676
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
|
3 | 2314 bp | 67.33 | 585.80 | 102.29 | |
scnpilot_p_inoc_scaffold_96387
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
|
3 | 1404 bp | 69.73 | 672.97 | 98.29 | |
scnpilot_p_inoc_scaffold_39913
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
|
3 | 1639 bp | 68.40 | 808.66 | 96.10 | |
scnpilot_p_inoc_scaffold_61458
Species:
Thiobacillus denitrificans (66.67%)
|
3 | 1837 bp | 69.57 | 735.14 | 73.82 | |
scnpilot_p_inoc_scaffold_35710
Species:
BJP_IG2102_Gammaproteobacteria_62_140 (100%)
|
3 | 2394 bp | 67.96 | 670.86 | 87.59 | |
scnpilot_p_inoc_scaffold_47334
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
|
3 | 1430 bp | 62.59 | 734.58 | 95.04 | |
scnpilot_p_inoc_scaffold_72118
Order:
Hydrogenophilales (100%)
|
3 | 1996 bp | 65.93 | 601.50 | 88.08 | |
scnpilot_p_inoc_scaffold_76584
Order:
Hydrogenophilales (100%)
|
3 | 1448 bp | 65.68 | 606.22 | 80.18 | |
scnpilot_p_inoc_scaffold_48618
Species:
GWE1_Thiobacillus_62_9_curated (66.67%)
|
3 | 3537 bp | 63.10 | 561.58 | 82.36 |