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scnpilot_p_inoc_scaffold_1334

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1334_1
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1137
DNA (1137bp) protein (379aa)
2-oxoacid:ferredoxin oxidoreductase, gamma subunit n=1 Tax=Variovorax sp. CF313 RepID=J2TH41_9BURK
2-oxoacid:ferredoxin oxidoreductase, gamma subunit {ECO:0000313|EMBL:EJL77812.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
indolepyruvate oxidoreductase subunit b
scnpilot_p_inoc_scaffold_1334_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1179..2147
DNA (969bp) protein (323aa)
Putative BUG-like extracytoplasmic solute binding receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1XF45_VARPD
putative BUG-like extracytoplasmic solute binding receptor, TTT family
Putative BUG-like extracytoplasmic solute binding receptor, TTT family {ECO:0000313|EMBL:AGU51116.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
scnpilot_p_inoc_scaffold_1334_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2187..2387)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI60_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK88900.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
scnpilot_p_inoc_scaffold_1334_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2603..3307)
DNA (705bp) protein (235aa)
Urea ABC transporter ATP-binding protein UrtE {ECO:0000313|EMBL:EIK88899.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EIK88899.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
Urea ABC transporter ATP-binding protein UrtE n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI59_9BURK rbh
ABC-type branched-chain amino acid transport system, ATPase component
scnpilot_p_inoc_scaffold_1334_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3318..4193)
DNA (876bp) protein (292aa)
Urea ABC transporter, ATP-binding protein UrtD {ECO:0000313|EMBL:EIK88898.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EIK88898.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
Urea ABC transporter, ATP-binding protein UrtD n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI58_9BURK rbh
ABC transporter-like protein
scnpilot_p_inoc_scaffold_1334_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4190..5314)
DNA (1125bp) protein (375aa)
Inner-membrane translocator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI57_9BURK rbh
Inner-membrane translocator {ECO:0000313|EMBL:EIK88897.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga
inner-membrane translocator
scnpilot_p_inoc_scaffold_1334_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5311..6909)
DNA (1599bp) protein (533aa)
Urea ABC transporter permease urtb n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI56_9BURK rbh
Urea ABC transporter permease urtb {ECO:0000313|EMBL:EIK88896.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydroge
inner-membrane translocator
scnpilot_p_inoc_scaffold_1334_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6928..8235)
DNA (1308bp) protein (436aa)
Branched-chain amino acid ABC transporter periplasmic amino acid-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI55_9BURK rbh
Branched-chain amino acid ABC transporter periplasmic amino acid-binding protein {ECO:0000313|EMBL:EIK88895.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com
branched-chain amino acid ABC transporter periplasmic amino acid-binding protein
scnpilot_p_inoc_scaffold_1334_9
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8428..8652)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034A8C82
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIU27680.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
scnpilot_p_inoc_scaffold_1334_10
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8645..10717)
DNA (2073bp) protein (691aa)
carbon starvation protein A n=1 Tax=Acidovorax avenae RepID=UPI0002E2E757 rbh
Carbon starvation protein CstA {ECO:0000313|EMBL:ADX48000.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax aven
carbon starvation protein CstA
scnpilot_p_inoc_scaffold_1334_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10884..11519)
DNA (636bp) protein (212aa)
Transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XE70_VARPD
transcriptional regulator, LuxR family
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AGU51222.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov
scnpilot_p_inoc_scaffold_1334_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11528..12856)
DNA (1329bp) protein (443aa)
Putative signal transduction histidine kinase n=1 Tax=Variovorax paradoxus B4 RepID=T1XF81_VARPD rbh
putative signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AGU51223.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source=
scnpilot_p_inoc_scaffold_1334_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12908..13924)
DNA (1017bp) protein (339aa)
Response regulator receiver protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI53_9BURK rbh
Response regulator receiver protein {ECO:0000313|EMBL:EIK88893.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrog
two component LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_1334_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13917..17429)
DNA (3513bp) protein (1171aa)
Periplasmic sensor hybrid histidine kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI52_9BURK rbh
Periplasmic sensor hybrid histidine kinase {ECO:0000313|EMBL:EIK88892.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source=
integral membrane sensor hybrid histidine kinase
scnpilot_p_inoc_scaffold_1334_15
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17513..17815
DNA (303bp) protein (101aa)
urease (EC:3.5.1.5)
Urease subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850};; Urea amidohydrolase subunit gamma {
Urease subunit gamma n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=URE3_METPP
scnpilot_p_inoc_scaffold_1334_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17832..18419
DNA (588bp) protein (196aa)
Urease accessory protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI50_9BURK rbh
Urease accessory protein {ECO:0000313|EMBL:EIK88890.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp
HupE/UreJ protein
scnpilot_p_inoc_scaffold_1334_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18425..18730
DNA (306bp) protein (102aa)
Urease subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01954};; Urea amidohydrolase subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; TaxID=795665 species="Bacteria
urease subunit beta (EC:3.5.1.5)
Urease subunit beta n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI49_9BURK
scnpilot_p_inoc_scaffold_1334_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18730..20448
DNA (1719bp) protein (573aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953
urease subunit alpha (EC:3.5.1.5)
Urease subunit alpha n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI48_9BURK rbh
scnpilot_p_inoc_scaffold_1334_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20448..21002
DNA (555bp) protein (185aa)
Urease accessory protein UreE n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI47_9BURK
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hyd
ureE; urease accessory protein UreE
scnpilot_p_inoc_scaffold_1334_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20968..21684
DNA (717bp) protein (239aa)
Urease accessory protein UreF n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI46_9BURK rbh
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogen
ureF; urease accessory protein
scnpilot_p_inoc_scaffold_1334_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21681..22352
DNA (672bp) protein (224aa)
Urease accessory protein UreG n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI45_9BURK rbh
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogen
Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase
scnpilot_p_inoc_scaffold_1334_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22584..22742
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI44_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK88884.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
Displaying 22 items

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