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scnpilot_p_inoc_scaffold_583_9

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 5078..7366

Top 3 Functional Annotations

Value Algorithm Source
Lysine decarboxylase {ECO:0000313|EMBL:EIK88563.1}; EC=4.1.1.18 {ECO:0000313|EMBL:EIK88563.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hyd similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 762.0
  • Bit_score: 1516
  • Evalue 0.0
Lysine decarboxylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MH73_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 762.0
  • Bit_score: 1516
  • Evalue 0.0
  • rbh
ldcC; arginine/lysine/ornithine decarboxylase similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 763.0
  • Bit_score: 1377
  • Evalue 0.0

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2289
ATGAAGTTCCGTTTCCCCATCGTCATCATCGACGAGGATTTCCGCTCCGAGAACACCTCGGGCCTGGGCATTCGCGCGCTCGCGCAGGCCATCGAAAGCGAGGGCATGGAGGTCGTGGGCGTCACGAGCTATGGCGACCTGTCGCAGTTCGCGCAGCAGCAAAGCCGCGCCAGCGCCTTCATTCTGTCCATCGACGACGAGGAGTTCAGCCAGGGGCCGGACCTCGACCCCGCGGTGCTGAACCTGCGCAACTTCATCGAAGAGGTGCGCCGCAAGAACGCCGACGTGCCGATCTATATCTACGGCGAGACCAAGACCAGCCGGCACCTGCCCAACGACGTGCTGCGCGAGCTCCACGGCTTCATCCACATGTTCGAGGACACGCCCGAGTTCGTGGCGCGCCACATCATCCGCGAGGCCAAGAGCTACCTCGAAGGTATTCAGCCGCCGTTCTTCAAGGCCCTGCTGGACTACGCCGAGGACGGCTCCTATTCCTGGCACTGCCCGGGCCATTCGGGTGGCGTGGCCTTCCTCAAGAGTCCCGTGGGCCAGATGTTCCACCAGTTCTTCGGCGAGAACATGCTGCGCTCGGACGTGTGCAACGCGGTCGAAGAGCTGGGCCAGCTGCTCGACCACAACGGCGCCATCGGCGCCAGCGAGCGCAACGCGGCGCGCATCTTCAACGCCGACCACTGCTTCTTCGTCACCAACGGCACCAGCACCAGCAACAAGATGGTCTGGCACCACACGGTGGCCCCGGGCGACGTGGTGGTGGTGGACCGCAACTGCCACAAGTCCATCCTCCACAGCATCATCATGACGGGCGCCGTCCCCGTCTTCCTCAAGCCCACGCGCAACCACTACGGCATCATCGGCCCGATCCCGCAGAGCGAGTTCGAGATCGAGGCCATCCAGGCCAAGATCCGCGCCAACCCGCTGCTCAAGGGCGTGGACGCCGCCGCCGTCAAGCCGCGCATCCTCACCCTCACGCAGAGCACCTACGACGGCGTGCTCTACAACACCGAGGCCATCAAGCAGATGCTGGACGGCTACGTCGGCAACCTGCACTTCGACGAAGCCTGGCTGCCGCACGCGGCCTTCCATCCCTTCTATGGCAACTACCACGCCATGGGCAAGAAGCGCGCGCGGCCCATGGAGTCGGTGGTGTACGCCACCCAGTCCATCCACAAGCTGCTGGCCGGCATCAGCCAGGCCAGCCATGTGCTGGTGCAGGACTCGCAGAACGTCAAGCTCGACCGGCACCTGTTCAATGAGTCCTACCTGATGCACACCAGCACCAGCCCGCAGTATGCGATCATCGCGAGTTGCGACGTGGCCGCGGCCATGATGGAGCCGCCCGGTGGCCGCGCGCTGGTCGAGGAAAGCCTGCTGGAGGCGCTGGACTTCCGCCGCGCCATGCGCAAGGTCGAGGACGACTTCGGCGCCGACGACTGGTGGTTCAAGGTCTGGGGCCCGGACCGCCTGGCCGACGAGGGCGTGGGCGAGGCCAAGGACTGGGTGCTCAACCGCCGCCGCGACGACGCCGCCGAGCACCACACCGAGCGCGACTGGCACGGCTTCGGCGACATGGCGCCGGGCTTCAACATGCTGGACCCGATCAAGGCCACCATCGTCACGCCCGGCCTCAACATGGACGGCAGCTTCGGCGAGACCGGCATCCCCGCGTCCATCGTCACCAAGTTCCTGGCCGAGCACGGCGTGGTGGTGGAGAAGACCGGCCTCTACAGCTTCTTCATCATGTTCACCATCGGCATCACCAAGGGCCGCTGGAACACGCTGCTCACGGCGCTGCAGCAATTCAAGGACGACTACGAGAAGAACCAGCCGATGTGGCGCATCATGCCGGAGTTCTGCGCCAAGCAGCCGCGCTACGAGCAGATGGGCCTGCGCGACCTGTGCCAGCACGTGCACGCGCTCTACGCCAAGTACGACATCGCGCGCCTGACCACCGAGATGTACCTGAGCGACCTCACGCCGGCCATGAAGCCCAGCGAGGCCTTCGCCCACATCGCCCAGCGCACCACCGAGCGTGTGCCCATCGACGAGCTGGAGGGCCGCATCACCACCAGCTTGGTGACGCCGTACCCGCCGGGCATCCCGCTGCTGATCCCGGGCGAGGTGTTCAACCGCAAGATCGTTGACTACCTCAAGTTCAACCGCGAGTTCGCGCGCGAGTGCCCGGGTTTCGAGACCGACATCCACGGCCTGGTGGAGACCGTGGGCGAGGACGGCCGCAAGGCCTATTTCGCGGACTGCGTGAAGGCCTGA
PROTEIN sequence
Length: 763
MKFRFPIVIIDEDFRSENTSGLGIRALAQAIESEGMEVVGVTSYGDLSQFAQQQSRASAFILSIDDEEFSQGPDLDPAVLNLRNFIEEVRRKNADVPIYIYGETKTSRHLPNDVLRELHGFIHMFEDTPEFVARHIIREAKSYLEGIQPPFFKALLDYAEDGSYSWHCPGHSGGVAFLKSPVGQMFHQFFGENMLRSDVCNAVEELGQLLDHNGAIGASERNAARIFNADHCFFVTNGTSTSNKMVWHHTVAPGDVVVVDRNCHKSILHSIIMTGAVPVFLKPTRNHYGIIGPIPQSEFEIEAIQAKIRANPLLKGVDAAAVKPRILTLTQSTYDGVLYNTEAIKQMLDGYVGNLHFDEAWLPHAAFHPFYGNYHAMGKKRARPMESVVYATQSIHKLLAGISQASHVLVQDSQNVKLDRHLFNESYLMHTSTSPQYAIIASCDVAAAMMEPPGGRALVEESLLEALDFRRAMRKVEDDFGADDWWFKVWGPDRLADEGVGEAKDWVLNRRRDDAAEHHTERDWHGFGDMAPGFNMLDPIKATIVTPGLNMDGSFGETGIPASIVTKFLAEHGVVVEKTGLYSFFIMFTIGITKGRWNTLLTALQQFKDDYEKNQPMWRIMPEFCAKQPRYEQMGLRDLCQHVHALYAKYDIARLTTEMYLSDLTPAMKPSEAFAHIAQRTTERVPIDELEGRITTSLVTPYPPGIPLLIPGEVFNRKIVDYLKFNREFARECPGFETDIHGLVETVGEDGRKAYFADCVKA*