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scnpilot_p_inoc_scaffold_583_21

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 20556..21530

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 324.0
  • Bit_score: 575
  • Evalue 5.70e-161
tRNA pseudouridine synthase B n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MH62_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 324.0
  • Bit_score: 575
  • Evalue 4.10e-161
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 328.0
  • Bit_score: 429
  • Evalue 1.00e-117
  • rbh

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGCAGCGCCAACGCACGAGGGTGCAACGGCGCCCCGTGCATGGGGTGCTGCTGCTCGACAAACCGCTGGGCCTGTCCAGCAACCAGGCCTTGCAGAAGGCCAAGTGGCTGCTGCGCGCTGAAAAAGCCGGCCACACCGGCACGCTCGACCCCCTGGCCACGGGCGTTCTGCCGCTGTGTTTTGGCGCGGCCACCAAGTTCAGCCAGCTGCACCTGGACGCCGACAAGACCTACGAAACCACCGTGCGACTGGGCGTGCGCACGCGCACGGCCGACGCCGAGGGCGAGGTCATCGACACCCGCCCCGTGTCGTGCTCCGCCGGCCAGGTGGTGGAGGTGCTGGACCGCTTCATGGGCGAGATCGACCAGGTGCCGCCCATGCACAGTGCGCTCAAGAAGGACGGCAAGGCCCTGTACGAATACGCGCGCGAAGGCGAGACCGTGGCGCGCGAGCCGCGCCGCGTGCGCATCCACGAGATCGAACTGCTCGACATGCGGCTGCAGGGCGAAGCCCCCCAGCTGCGCCTGCGCGTGGTCTGCAGCAAGGGCACCTACATCCGCACGCTCGGCGAAGACATCGGCGAGGCCCTGGGCTGCGGCGGCCACCTGATCGCGCTGCGCCGCGTGGCCACCGGGCCGTTCGGCGTGGCCGACGCCGTCACGCTCGACGCACTTGAGGCGATGGGCGAAGCCGAGCGGCTGGGCGCCCTGAAACCGGTCGAGGCCCTGCTCGAGGGCCATGAACGGATCGCGCTCGACGCCGAGCATGCCGGGCGCTTCCTGAGCGGCGTGCGCCGCCGTGGCGACTGGCCCAACCGCGAGCGCGTGGCCGTCTTCGGCCCTTCGCCCGCCAACCCCACGCCCACCGTCCTGCTGGGCACCGCCCACGTACAGGGCGGCGAACTCATCCCGGGGCGCCTGTTGAGCCCCACCGATATCCAGCAAATCCTCGAAACAGAGGCCCCCGCACCATGA
PROTEIN sequence
Length: 325
MQRQRTRVQRRPVHGVLLLDKPLGLSSNQALQKAKWLLRAEKAGHTGTLDPLATGVLPLCFGAATKFSQLHLDADKTYETTVRLGVRTRTADAEGEVIDTRPVSCSAGQVVEVLDRFMGEIDQVPPMHSALKKDGKALYEYAREGETVAREPRRVRIHEIELLDMRLQGEAPQLRLRVVCSKGTYIRTLGEDIGEALGCGGHLIALRRVATGPFGVADAVTLDALEAMGEAERLGALKPVEALLEGHERIALDAEHAGRFLSGVRRRGDWPNRERVAVFGPSPANPTPTVLLGTAHVQGGELIPGRLLSPTDIQQILETEAPAP*