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scnpilot_p_inoc_scaffold_1102_13

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(12248..13747)

Top 3 Functional Annotations

Value Algorithm Source
carnitine dehydratase n=1 Tax=Rhodococcus sp. 114MFTsu3.1 RepID=UPI00037D7976 similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 488.0
  • Bit_score: 610
  • Evalue 1.30e-171
  • rbh
Carnitine dehydratase {ECO:0000313|EMBL:KIC45929.1}; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-S4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 485.0
  • Bit_score: 616
  • Evalue 3.40e-173
carnitine dehydratase similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 500.0
  • Bit_score: 602
  • Evalue 1.00e-169

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Taxonomy

Ruegeria sp. ANG-S4 → Ruegeria → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
ATGGACACCCGAACCAACAGCCCCGCCGCCGACGCCACCGAACGCCTGCAGATGTACATCGGCGGCCAGTGGGTCGCTGGCACCAGCGGCCAGACGCTGGACAGCCTCAATCCCTACACGCAGAAAGTCTGGGCCACGGTACCCGACGCCAGCGAGGCCGACGTGAAGGCGGCCGTCGCTGCCGCGCGCGAGGCCTTCGACAACGGCCCCTGGCGCCAGACCACGCCGCAGCAGCGCGCCGCGCTGATGCGCAAACTGGGTGACCTGATCGCGCGCGACGCCGAGCGCATGGCGCGCATCGAGTCCATGGACAACGGCAAGCTGCTGCGCGAAATGCTGGGTCAGTGGAAGTACCTGCCCGAGTGGATGTACTACTTTGCCGGCCAGGCCACGCAGAGCCAGGGCGAGGTGCTGCCCAGCGACCGCCCCAATTTCATCGCTTTCACGCGCAAGGAGCCCATCGGCGTGGTCGCGGCCATCACGCCCTGGAACTCGCCCTGCCTGCTGCTGATGTTCAAGCTCGCGCCCGGGCTGGCGGCGGGGTGCACCTTCGTCGTCAAGCCGTCCGAGCACACGCCGGTGTCCACCTTGCGCTTCGCCGAGCTGGTGGAAGAGGCGGGCTTTCCGCCCGGCGTGTTCAACGTCGTCACCGGCGGGGCCGACGCGGGCCGCTGGCTGGTCTCCAGCCCCGACATCGACAAGATCAGCTTCACCGGCTCCGACGGCGTGGGCAAGGCCATCGCACGCGCGGGCGCCGAGAACTTCACGCGCGTCTCCCTCGAACTCGGGGGCAAGTCGCCGCAGGTGGTGTTCGACGACTGCGACATCGAGGCGGCCGTCAACGGCGTGATCTCGGGTGTGTACGCGGCCACCGGCCAGACCTGCATGGCCGGCTCGCGCCTCATCGTGCACCGCGCCATCCACGACGAAGTGGTCAAGCGCCTGGTGGCGCGCGTGAGCGCCATCAAGCTCGGCGACCCGCTGGACATGGCCAGCGAAATGGGCCCGGCCGCCACCGGCCAGCAATTCCAGAAGATCCTGTCGATGGTGAGGTCGGCCGAGGCCGAAGGCGCCACGCTGGCCTATGGTGGTCGACAGGCGCCGCAGGGCGGCTTCTTCGTGCAGCCCACCGTGCTCACCCAGGTGCACAACCGGATGGACATCGCGCGCGAAGAGGTGTTCGGCCCCGTGCTCGCGGTCATTCCCTTCGACACCGAGGAAGAGGCCGTGAAGATCGCCAACGACACCCGCTACGGCCTGGCCGCTGGCATCTGGACGCAGAACGTTCAGCGCGCGCACCGTGTGGCGGGACAACTGCGCGCGGGCAGCGTGTGGATCAACGCCTACCGCGTCACCGCGCCTTTCGCGCCCTTCGGCGGCTTCAAGCACAGCGGCGTCGGCCGCGAGAACGGCCACGAAGGCATGAACGAATTCCTCGAGACCAAGACCGTGTGGGTGGAGCTGAGCGGCGCGCTGCGCGACCCCTTCAAGCTGGGCTGA
PROTEIN sequence
Length: 500
MDTRTNSPAADATERLQMYIGGQWVAGTSGQTLDSLNPYTQKVWATVPDASEADVKAAVAAAREAFDNGPWRQTTPQQRAALMRKLGDLIARDAERMARIESMDNGKLLREMLGQWKYLPEWMYYFAGQATQSQGEVLPSDRPNFIAFTRKEPIGVVAAITPWNSPCLLLMFKLAPGLAAGCTFVVKPSEHTPVSTLRFAELVEEAGFPPGVFNVVTGGADAGRWLVSSPDIDKISFTGSDGVGKAIARAGAENFTRVSLELGGKSPQVVFDDCDIEAAVNGVISGVYAATGQTCMAGSRLIVHRAIHDEVVKRLVARVSAIKLGDPLDMASEMGPAATGQQFQKILSMVRSAEAEGATLAYGGRQAPQGGFFVQPTVLTQVHNRMDIAREEVFGPVLAVIPFDTEEEAVKIANDTRYGLAAGIWTQNVQRAHRVAGQLRAGSVWINAYRVTAPFAPFGGFKHSGVGRENGHEGMNEFLETKTVWVELSGALRDPFKLG*