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scnpilot_p_inoc_scaffold_1201_41

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(46978..48489)

Top 3 Functional Annotations

Value Algorithm Source
tctA; putative tricarboxylate transport protein TctA id=5080152 bin=GWF1_Burkholderiales_GWF1_66_17 species=Pseudogulbenkiania ferrooxidans genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 502.0
  • Bit_score: 844
  • Evalue 5.60e-242
  • rbh
tctA; tricarboxylate transport protein TctA Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 502.0
  • Bit_score: 844
  • Evalue 7.80e-242
tctA; tricarboxylate transport protein TctA similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 499.0
  • Bit_score: 689
  • Evalue 6.50e-196

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1512
ATGGACACCTTGCGACACCTGATGGACGGCTTCGGCGTGGCCTTCAGCCCCATCAACCTGCTGATCGCCGCCATCGGCTCCTTCATCGGCACCGTGGTCGGCCTGCTGCCTGGCCTGGGTCCCATCAACGGCGTGGCCATTCTCATGCCCCTGGCCTTCGCGATGAAACTGCCGCCCGAGGCCTCGCTCATCCTGCTGGCCGCCGTCTACATCGGCTGCGAGTACGGCGGACGCATCTCCTCCATCCTGCTCAACGTGCCGGGCGACGCCGGCGCCATCATGACCGCGCTGGACGGCTACCCCATGGCCCGCCAGGGCCTGGCGGGCGTGGCCCTGTCCATCTCGGCCTGGAGCTCCTTCGTGGGTTCGCTCATCGCCACGCTGGGCATCGTGATGTTCGCGCCGCTGCTGGCCGCCTGGGCGCTGTCTTTCGGGCCGGCCGAGTACTTCGCGCTGATGTGCTTCGCCTTCGCCTGCATCGCCGGCCTGCTGGGCAACGCGCCGGTGAAGGCCGGCCTGGCGGCCCTCATCGGCCTGTCCATGTCCTGCGTGGGCCTGGACGCCAACTCCGGCGTCTACCGCTTCACCGGCGGCGACGTGCACCTGTCCGACGGCATCCAGTTCGTGGTGGTGGTCATCGGCGTGTTCTCCATCAGCGAGATCCTGCTCATGCTGAGGGAACACCACGCCAGCGCGGGGCCCATCCCCCAGACCGGCCGCACGCTCTTCAACCTGCGCGAGATGGCCCACACGTGGTGGAGCACCCTGCGCGCCAGCGTCGTGGGCTTCGTGGTGGGCGTGCTGCCCGGCGCGGGCGCCACCGTGGCCAGCGCCATGACCTACGCCATGGAGAAGCGGCTGATCGACAAGGACGGCACGTTCGGCCAGGGCGACATCCGCGGCGTGGCCGTGCCCGAGGCCGCCAACAACTCGGCCGCCACCGGCTCCTTCGTGCCCATGCTGACCCTGGGCGTGCCGGGCTCGGGCACCACGGCCGTGATGATGGGCGCGCTGGCGCTCTACAACATCACGCCCGGCCCCGCCCTGTTCAGCCAGCAGCCCGACCTGGTGTGGGGCCTGATCGCCTCGATGTTCCTGGCCAACGTGATCCTGCTGGTGCTCAACATTCCCATGGTGGGCCTGTTCACCCGCATCCTGAACGTGCCCTACTGGGTGCTGGTGCCCGGCATCCTGGCGGTCTCCAGCGTGGGCGTCTACGCGGTGCACGCCACCACCTTCGACCTGCTGCTGATGGCCGCGCTGGGCTTCGCGGCCTACCTGCTGCGCCAGCAGGGCGTGCCCATGGCGCCGCTGATCCTGGGTTTCGTGCTCGGCCCGCTGATGGAGCAGAACCTGCGCCGCGCCCTGTCCATCAGCAACGGCGACGCCGCCGTGCTGGTGCACAGCCCGATCGCCACCGGCCTGTGGATCGCGACCGCGCTCATCCTCACCGTGCCGGCCCTGCTGCGGCTGCGGGCCACGCGCGAACGCGCCGTGGAGGCGGCGCGGTGA
PROTEIN sequence
Length: 504
MDTLRHLMDGFGVAFSPINLLIAAIGSFIGTVVGLLPGLGPINGVAILMPLAFAMKLPPEASLILLAAVYIGCEYGGRISSILLNVPGDAGAIMTALDGYPMARQGLAGVALSISAWSSFVGSLIATLGIVMFAPLLAAWALSFGPAEYFALMCFAFACIAGLLGNAPVKAGLAALIGLSMSCVGLDANSGVYRFTGGDVHLSDGIQFVVVVIGVFSISEILLMLREHHASAGPIPQTGRTLFNLREMAHTWWSTLRASVVGFVVGVLPGAGATVASAMTYAMEKRLIDKDGTFGQGDIRGVAVPEAANNSAATGSFVPMLTLGVPGSGTTAVMMGALALYNITPGPALFSQQPDLVWGLIASMFLANVILLVLNIPMVGLFTRILNVPYWVLVPGILAVSSVGVYAVHATTFDLLLMAALGFAAYLLRQQGVPMAPLILGFVLGPLMEQNLRRALSISNGDAAVLVHSPIATGLWIATALILTVPALLRLRATRERAVEAAR*