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scnpilot_p_inoc_scaffold_1201_43

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(49002..49988)

Top 3 Functional Annotations

Value Algorithm Source
extra-cytoplasmic solute receptor family protein 181 id=5080154 bin=GWF1_Burkholderiales_GWF1_66_17 species=Pseudogulbenkiania ferrooxidans genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 330.0
  • Bit_score: 565
  • Evalue 3.30e-158
  • rbh
extra-cytoplasmic solute receptor family protein 181 Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 329.0
  • Bit_score: 565
  • Evalue 4.60e-158
Tricarboxylate transport protein TctC similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 316.0
  • Bit_score: 432
  • Evalue 1.20e-118

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGACGCTTTCCAGGCACCTCGTGGCCGCGGCCCTGGCGGCCAGCGCGCTGGGCGCGATGGCCAACCCGCTGGCCAAGACCGAGTGCATCGCCCCCGCCAAACCCGGTGGCGGCTTCGACCTGACCTGCAAGCTGGCCCAGTCCGCGCTGCAGGACGGCAAGTTCATCGCCGACCCGATGCGCGTGACCTACATGCCAGGCGGCATCGGCGCGGTGGCCTACAACACCATCGTGGCCCAGCGCCCCGACGCGGCCAGCACCATCGTGGCCTTCTCCGGCGGCTCGCTGCTCAACCTGGCGCAGGGCAAGTTCGGCCGCTACACCGAGAACGACGTGCGCTGGCTGGCCGCCATCGGTACCGACTACGGCGCGGTCATCGTGGCCGAGAACTCGCCCTACCAGTCGCTCAAGGACGTCATGGCGGCCATCAAGGCCGACCCGAACAAGGTGGTGCTGGGCGCGGGCGGCACGGTGGGCAGCCAGGACTGGATGAAAGCCGCCCTGACCGCGCGCGCCGGCGGCGTGAACCCCAAGACCATGCGCTACGTGGCCTTCGAAGGCGGCGGCGAGGCCATGACCGCCCTGCAGGGCGGCCACATCCACGTCTTCACCGGCGACGCGGCCGAGGCCCTGCAGCAGCGCAAGGCGGGCGCCAAGATCCGCATCCTGGCCGTCATGAACGACAAGCGCCTGCCGGGCGAGATGGCCAACATCCCCACCGCGGCCGAACAGGGCTTCAACGTCGAATGGCCCATCGTGCGCGGCTTCTACCTCGGCCCCAAGGTCAGCGACGCCGACTACCAGGCCTGGGCCGAGGCCTTCGCCAAGATGATGGCCACGCCGGCCTACGACAAGCTGCGCGAAGAGCGCGGCCTGTTCCCCCTGGCCATCACCGGGGCGCCGCTGGACGCCTACGTGAAGCAGCAGGTGGCCGGCTACCGCAAGCTGGCCGAAGAGTTCGGCCTGTCGACCAAGCCGGCGAACTGA
PROTEIN sequence
Length: 329
MTLSRHLVAAALAASALGAMANPLAKTECIAPAKPGGGFDLTCKLAQSALQDGKFIADPMRVTYMPGGIGAVAYNTIVAQRPDAASTIVAFSGGSLLNLAQGKFGRYTENDVRWLAAIGTDYGAVIVAENSPYQSLKDVMAAIKADPNKVVLGAGGTVGSQDWMKAALTARAGGVNPKTMRYVAFEGGGEAMTALQGGHIHVFTGDAAEALQQRKAGAKIRILAVMNDKRLPGEMANIPTAAEQGFNVEWPIVRGFYLGPKVSDADYQAWAEAFAKMMATPAYDKLREERGLFPLAITGAPLDAYVKQQVAGYRKLAEEFGLSTKPAN*