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scnpilot_p_inoc_scaffold_1146_20

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(17193..18314)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGH3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 373.0
  • Bit_score: 645
  • Evalue 3.70e-182
  • rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EIK88313.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydr similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 373.0
  • Bit_score: 645
  • Evalue 5.20e-182
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 379.0
  • Bit_score: 324
  • Evalue 4.00e-86

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGCGCCGCCGTCACGTCCTCCAAGCCGCCGCCATTGGCGCCGTCCCGCTGATCGCGCGGGCCCAGGAATCCAGCGACCTGGTCGTCGCCCACATCGGCCCGTTCACCGTGCTGCCGGCGCCGGACGCCAAGGAGCTGCACGAAGGGGCCTCGGCCGCCTTCAACGACCTCAACGGCAAGGGCGGCATCGCCGGCCGCAAGGTGGAGCTGCTGCGGCTGGACGACACCTACACCTTCGACGGCTTCAAGGCCCGCCTGGCCGAGGCCATGCCGCGCAAGCCCCTGGCCTTGCTGACGCCCCTGGGCTCGGCCACGCTCAAGCAGATGCTGGACAGCAAGCTGCTGGACAGCACGGACCTCGTGGTCATCAACGCCGTGCCCGGCGCCGCCGTGCTGCGCGACCCCGGCCACCCCAAGCTGTTCCACATCCGCGCCGGCGACGACCAGCAGATCCGCAAGATCGTGTCGCATGCGCGCGCGCTGAACGTGCAGTCCATGGGCGTGCTGTACCAGAACATCCCGATCGGCTCGTCCGGCCTGGCCTCGGCCAAGGCGGCCGCGCAGGGCACGGGGCTGGAGATCATCGGCGCCGAGTCGGGCACGGAGCTGGCCGACATCACCAAGGCCGCGCAGGCCATCGCCTCGCGCAACCCGCATTCGGCCATGGTCATCGGCTCGCCCAAGTTCATGGGCCAGAGCATCGCCGCGCTGCGCGCGGCGGGCGTCTCGCAGCAGCTGTTCTCGCTGTCCTACCTGCCGGCACCGGCGCTCAAGGCCCTGGCCGGCGCGGGCGCGCGCGGCGTGGGCATCGCCCAGACCTTCCCCAACCCGAACGGCGTGACCTCGCCGCTGCAGCGCGCCTTCCGCGCGGCGATGCAGCGCTCGCACCCCGAGGTGAAGACCTACACCCCGTTCCACCTCGAAGGTTATGTGACGGCCCAGGTCTTCTCCGAGGCCGCGCGCCGCGCCCGCCCGCTCACCCCCACCGGCCTGGCCGAGGCCCTGCGCCGCATGGGCGAACTCGACCTCGGCGGCTTCCGCGTGGATTTCAGCAAGGGCAACGAGGGCAGCCAGTGGGTCGACATCGGCGTGGCCACCGCCGAGGGCCGGCTGCTCTACTGA
PROTEIN sequence
Length: 374
MRRRHVLQAAAIGAVPLIARAQESSDLVVAHIGPFTVLPAPDAKELHEGASAAFNDLNGKGGIAGRKVELLRLDDTYTFDGFKARLAEAMPRKPLALLTPLGSATLKQMLDSKLLDSTDLVVINAVPGAAVLRDPGHPKLFHIRAGDDQQIRKIVSHARALNVQSMGVLYQNIPIGSSGLASAKAAAQGTGLEIIGAESGTELADITKAAQAIASRNPHSAMVIGSPKFMGQSIAALRAAGVSQQLFSLSYLPAPALKALAGAGARGVGIAQTFPNPNGVTSPLQRAFRAAMQRSHPEVKTYTPFHLEGYVTAQVFSEAARRARPLTPTGLAEALRRMGELDLGGFRVDFSKGNEGSQWVDIGVATAEGRLLY*