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scnpilot_p_inoc_scaffold_1149_21

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 22681..23598

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerD n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK83_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 305.0
  • Bit_score: 584
  • Evalue 8.20e-164
  • rbh
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenopha similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 305.0
  • Bit_score: 584
  • Evalue 1.20e-163
xerD; site-specific recombinase similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 295.0
  • Bit_score: 447
  • Evalue 2.60e-123

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGGCCCCCAGCAAGAAGGCCGACGAGCACCCCACGCTGTCGGCCTTCATCGACAGCCTCTGGCTCGAAGAGGGGTTGTCGCGCAACACCCTGGATGCCTACCGCCGCGACCTGGCGCTCTTCGACGCCTGGCTGCGCGGCCAGGGCAAGGCCCTGCCCGAGGCGCTGGAAGCCGACATCCACGGCTATTTCGCCGAGCGCCACGCGCAGACGCGGGCCACCACGGCGAACCGCCGCCTCACGGTGTTTCGCCGCTACTACCGCTGGGCCCTGCGCGAGCGTTTCATCACCGCCGACCCGACCCTGCGGCTGGCGCCCGCGCGCCAGCCGCTGCGCGTGCCCAAGACCTTGAGCGAGGCCCAGGTGGAGGCCCTGCTGGCCGCGCCGGACGACGGCACCCCGCTGGGCCTGCGCGACCGCAGCATGCTGGAGCTGATGTACGCCAGCGGGTTGCGCGTGAGCGAACTGGTCACCCTCAAGACCTGGCACCTGGGGCTGGCCGAGCAGGTGCTTCGCATCACGGGCAAGGGCAACAAGGAGCGGCTGGTGCCCTTCGGCCAGGTGGCGGGCGACTGGCTGCAGCGCTACCTCACCGAAGGCCGGCCGGCGATCCTGGGCGGCCTGGCGAGCGAGGACCTGTTCGTCACCTCGCGCGGCGCGCGCGCCGGCTCGGCCATGACGCGCGTGATGTTCTGGCAGCTGGTCAAGCGCTACGCGCGCGAGGCCGGCATCACCGCGCCGCTGTCGCCGCACACCCTGCGCCACGCCTTCGCCACCCACCTGCTCAACCACGGCGCCGACCTGCGCGCCGTGCAGATGCTGCTGGGCCACGCCGACATCTCCACCACCACCATCTACACCCATGTGGCGCGCGAGCGGCTCAAGACGGTGGTGGCGCAGCACCACCCGCGCGGCTGA
PROTEIN sequence
Length: 306
MAPSKKADEHPTLSAFIDSLWLEEGLSRNTLDAYRRDLALFDAWLRGQGKALPEALEADIHGYFAERHAQTRATTANRRLTVFRRYYRWALRERFITADPTLRLAPARQPLRVPKTLSEAQVEALLAAPDDGTPLGLRDRSMLELMYASGLRVSELVTLKTWHLGLAEQVLRITGKGNKERLVPFGQVAGDWLQRYLTEGRPAILGGLASEDLFVTSRGARAGSAMTRVMFWQLVKRYAREAGITAPLSPHTLRHAFATHLLNHGADLRAVQMLLGHADISTTTIYTHVARERLKTVVAQHHPRG*