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scnpilot_p_inoc_scaffold_1221_7

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(7058..8197)

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion exporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MML2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 379.0
  • Bit_score: 689
  • Evalue 1.70e-195
  • rbh
Type III secretion exporter {ECO:0000313|EMBL:EIK90452.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 379.0
  • Bit_score: 688
  • Evalue 7.00e-195
flhB; flagellar biosynthesis protein FlhB similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 374.0
  • Bit_score: 445
  • Evalue 2.10e-122

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
GTGTCCCAGGACCAGACCGGCGACAAGACGGAAGCGGCCACGCCGCAGAAGCTGCGCAAGGCGCGCGAGCAGGGGCAGGTCGCGCGCTCCAAGGACTTGGCCACCGCCGTGGGCCTGGTGGTCTGCCTGCAGGCCATCGTGCTGCTGGCGCCGGGCTACCTGGCCGATTTCCGCCGCCTGTTCGCGCTCGGCTTCGTGGTGGCCGATGGCGACGGCGCGCTCGACAACCTGTTCTCGCACGCCTTCGTTCCGGTGATGCTGCTGCTGGCCAAGATGCTGCTGCCGCTGTTCATCATCCCGCTGTGCGTGCTGATCGCCTCGCTGTTTCCCGGCGGCTGGGTGCTGAGCGCCCAGAACCTGATGCCCAAGCTGGAGCGGCTCAATCCCTTGAGCTACTTCCAGCGCATCACCAAGCCCAAGCACCTGGCCGACTTCGCCACCACCGCGCTCAAGGCCTTCACGCTGTTCGGCGTGCTGTACTGGGTCATGAGCGGCAGCCTCGGCGGTTTCCTTCGCCTGAGCGCGCTGCCGCTGGGCGAGGCCTTGCCGCAGGCCTTCTCACTGGCGCAGGCGGCCGTGTTCTCGCTGGTGGCGGTGTTCGTGCTCTACGCGCTCATCGACGTGCCCGTGCAGCGCCTGGTCTATCTGCGCGAGCAGCGCATGAGCAAGCGCGACATCAAGGAAGAACACAAGACCACCGAGGGCCGGCCCGAGGTGAAACAGCGCATCCGCCAGATCCAGCAGCAGATCGCGCGCCGCGGCGTGCGCAAGACCGTTCCCACGGCCGACGTGGTAATCGTCAACCCCGAGCACTACGCCGTCGCCATCAAGTACGACACCCACAAGGCCGACGCGCCCTACGTGGTGGCCAAGGGCCTGGACGAAATGGCGCTGTACATCCGCCGCATCGCCGAGGAGGCGGGCGTCGAGGTGCTGCGCCTGCCGCCGCTGGCGCGCGCCGTGTACCACACCAGCCAGGTGCGCCAGCAGATCCCCGCCGCGCTGTACCAGGCGGTGGCCGTGGTGCTGCGCCACGTTCTCGCCCTCAAGGCGTTCCGCCAGGGCCAGCGCCGCAGCGAACCCCACCTGCCCCATGACCTCGACGTGCCCGCCCACCTGAGCGGCGACGGACCGACATGA
PROTEIN sequence
Length: 380
VSQDQTGDKTEAATPQKLRKAREQGQVARSKDLATAVGLVVCLQAIVLLAPGYLADFRRLFALGFVVADGDGALDNLFSHAFVPVMLLLAKMLLPLFIIPLCVLIASLFPGGWVLSAQNLMPKLERLNPLSYFQRITKPKHLADFATTALKAFTLFGVLYWVMSGSLGGFLRLSALPLGEALPQAFSLAQAAVFSLVAVFVLYALIDVPVQRLVYLREQRMSKRDIKEEHKTTEGRPEVKQRIRQIQQQIARRGVRKTVPTADVVIVNPEHYAVAIKYDTHKADAPYVVAKGLDEMALYIRRIAEEAGVEVLRLPPLARAVYHTSQVRQQIPAALYQAVAVVLRHVLALKAFRQGQRRSEPHLPHDLDVPAHLSGDGPT*