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scnpilot_p_inoc_scaffold_1537_7

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(7560..8543)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein K n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHR9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 331.0
  • Bit_score: 521
  • Evalue 7.00e-145
  • rbh
Type II secretion system protein K {ECO:0000256|PIRNR:PIRNR002786}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydro similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 331.0
  • Bit_score: 521
  • Evalue 9.80e-145
gspK; pseudopilin, general secretion pathway protein K similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 323.0
  • Bit_score: 328
  • Evalue 1.90e-87

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
GTGACACGCACCCACCAGCGCGGCGCCGCGCTGTTGCTGGCCATGCTCACCGTCACCCTGGTGGCCGCGCTGGCCGCCAGCGCGCTGTGGCAGCAATGGCGCGCGCTGGAGGTCGAGCGCGCGGAGCGCCAGCGCGCCCAGGCCGCCTGGATCCTGACCGGCGCGCTCGACTGGGCGCGCCTGATCCTGCGCGAGGATGGGCGCGGCAACCAGACCAATGGCAACCCCGACCACCTGGGCGAGCCCTGGGCGCTGCCGCTGGAAGAGGCCCGGCTGTCCAGCTTCCTCGCCGCCGACCGCGACAACACCGCCGACAGCACGCTCGAAGCCTTCCTCTCGGGCGAAATCACCGACCTGCAGTCGCGCCTGAACTTCAACAACGTGGCGCGCCTGACCACCGTCCAGAACGGTGCCGTGCCGCTCAAGTACGAGCTCTCCGAGCCCGACCTGGACAGCCTGCGCCGCCTGTACGAACTGCTCGGACTGCCGCGCAGCGAGCTCGAAGCCGCCGCCAAGGAGCTGCTGGCCAGTGCCCAGAAGTCCTTGAGCGACCCCCTGCCCGCGGACGCGGCCTCGCTGCTGCCGTCCAAGCTCTCGCAGCTCGCCTGGCTGGGCATTTCGCCCAGCAGCCTGGCGCGGCTGGAGCCCCACCTCACCGTGCTGCCGCTGCGCACCACGCTCAACCTGAACACCGCCAGCGCCGAGGCCATCGCCGCCTCCCTGCCGGGACTGGACCTGGCCATGGCGCGCCGCCTCGTCTCGGCGCGGGAGCGCACGCCGTTTCGCAGCATCGCCGAAGCGCAGCGCCTGCTGCCCCAGGGCCCGGCCGTCCTCAGCGACCAGTACCACGGCGTGCGCAGCAGCTTCTTCGAGGTGCGCGGCCGCCTGCGGCTGGACGACACCATCATCGAAGAGCGCTCCCTGGTGATGCGCCAGGCCCTGGACGCGCGCATCGTCTGGCGCGAGCGCTTCACGCGCCGCTGA
PROTEIN sequence
Length: 328
VTRTHQRGAALLLAMLTVTLVAALAASALWQQWRALEVERAERQRAQAAWILTGALDWARLILREDGRGNQTNGNPDHLGEPWALPLEEARLSSFLAADRDNTADSTLEAFLSGEITDLQSRLNFNNVARLTTVQNGAVPLKYELSEPDLDSLRRLYELLGLPRSELEAAAKELLASAQKSLSDPLPADAASLLPSKLSQLAWLGISPSSLARLEPHLTVLPLRTTLNLNTASAEAIAASLPGLDLAMARRLVSARERTPFRSIAEAQRLLPQGPAVLSDQYHGVRSSFFEVRGRLRLDDTIIEERSLVMRQALDARIVWRERFTRR*