ggKbase home page

scnpilot_p_inoc_scaffold_1413_2

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(282..1109)

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ85_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 275.0
  • Bit_score: 486
  • Evalue 1.60e-134
  • rbh
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:EIK89275.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 275.0
  • Bit_score: 485
  • Evalue 6.60e-134
xylose isomerase similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 273.0
  • Bit_score: 195
  • Evalue 2.10e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
GTGCGCCTTGCCCTGTGCAACGAGGTCCTCGCGCCCTGGCCCTTCGCGCGCCAGTGCGAATGGGCCGCGGCCGTGGGTTACCAGGGGCTGGAGCTGGCGCCGTTCACGCTGGGCGAGGCCGCGTGGCGCCTGCCGGCCAGCGAACGCACCGCCCTGCGCCGCGCCGCCAGCGACGCGGGCATCCGGGTCTCGGGCCTGCACTGGCTGCTGCGCCAGCCCGAGGGCCTGTCCATCACCTCGCCCGACGCCGCCGTGCGCGCGCGCACGCTGCAGGTGCTGCGCGGCCTGGTCGATCTCTGCGCCGAACTCGGCGGCGAGGTGCTGGTGCACGGCTCGCCCGCGCAGCGGCGCCTGACGCCGGGCGACGCGGCCGGCGCGCGCGAGCGCGCCGCCGAGGTCTTCGCCGCGGTGGCGGAGCACGCGCAGGCGGCGGGCGTCACCTACTGCATCGAGCCCCTGGCGCCGCCGGAGGCCGACTTCATCCACACCCTGGCCGAAGCCGCCACCCTCGTGCGCGCCATCGACCGGCCCGCGCTGCGCACCATGCTCGACTGCTGCGCCGCCGCGCGCGCCGAGGCCGAGCCGGTGCACGGGCTGCTGGCGCGCTGGCTGCCCAGCGGCCTGCTGGCCCACGTGCAGGTGAACGACCCGAACGGGCGCGGCCCCGGCCAGGGCGCGCTGGGCTTCGCCGACATCCTTCGCGCACTGCGCCGGCACGGCTACGCCGGCTGGCTGGCCGTGGAGCCCTTCGACCACCACCCCGATGGCCCGGCCGCCGCCGCGCGCGCCATCGGCTACCTGCGCGGCCTGCTGGAGGCCCTGGACTGA
PROTEIN sequence
Length: 276
VRLALCNEVLAPWPFARQCEWAAAVGYQGLELAPFTLGEAAWRLPASERTALRRAASDAGIRVSGLHWLLRQPEGLSITSPDAAVRARTLQVLRGLVDLCAELGGEVLVHGSPAQRRLTPGDAAGARERAAEVFAAVAEHAQAAGVTYCIEPLAPPEADFIHTLAEAATLVRAIDRPALRTMLDCCAAARAEAEPVHGLLARWLPSGLLAHVQVNDPNGRGPGQGALGFADILRALRRHGYAGWLAVEPFDHHPDGPAAAARAIGYLRGLLEALD*