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scnpilot_p_inoc_scaffold_1594_6

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 3403..4053

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPW1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 216.0
  • Bit_score: 407
  • Evalue 7.50e-111
  • rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:EIK91251.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydr similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 216.0
  • Bit_score: 406
  • Evalue 3.00e-110
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 216.0
  • Bit_score: 345
  • Evalue 9.80e-93
  • rbh

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
GTGAACAAGCCCTCCCCCGCGGCCCCCGAAGAGCGCCTGCGCGACGCCGACCGATCGCAGGCCACCATCCTCAAGGCCGCGCGCGACGAGTTCTCCGAACACGGGTTGGGCGGCGCGCGCATGGACCGCATCGCCGAGCGCGCGGGCCTGAACAAGCGGCTCATCTACTACTACTTCGAGGACAAGGAACGGCTGTTCCAGGCGGTGCTGGAGCAGACCTACCACCACATCCGCGAAGAAGAGCACAAGCTCAACCTGCTGCACCTCAAGCCCGAAACCGCGCTGCGCCGCCTGGTGGAGTTCACCTGGCACTACTACCTCGAGCACCCCGAGTTCCTCACCCTGCTCAACAGCGCCAACCTGCACAAGGCGCGGCACCTGGCGCAGTCCGAACGGGCGCGCGAACTGAACTCGCCGCTGGTCCTCATGCTGCAGGACATCATCGAGCGCGGCCAGGCCGACGGCAGCTTTCGCGGCGGCATCGACCCAGTGCAGCTCTACGTGTCGATCGCCGGGCTGGCGTACTTCTACCTGTCGAACAACCACACGCTGTCGGCCATCTTCGGGCGCGACCTGATGGCCCCCAAGGCCCTCAACGAACGGCTCTCGCACATGTGCGACGTGATCCTAGGGTATGTCCTGAGAGGCTGA
PROTEIN sequence
Length: 217
VNKPSPAAPEERLRDADRSQATILKAARDEFSEHGLGGARMDRIAERAGLNKRLIYYYFEDKERLFQAVLEQTYHHIREEEHKLNLLHLKPETALRRLVEFTWHYYLEHPEFLTLLNSANLHKARHLAQSERARELNSPLVLMLQDIIERGQADGSFRGGIDPVQLYVSIAGLAYFYLSNNHTLSAIFGRDLMAPKALNERLSHMCDVILGYVLRG*