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scnpilot_p_inoc_scaffold_1660_16

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(15461..17185)

Top 3 Functional Annotations

Value Algorithm Source
peptidoglycan-binding domain-containing protein; K02450 general secretion pathway protein A Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 582.0
  • Bit_score: 699
  • Evalue 4.60e-198
gspA; general secretion pathway protein A; K02450 general secretion pathway protein A id=5082691 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 573.0
  • Bit_score: 681
  • Evalue 7.10e-193
  • rbh
peptidoglycan-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 591.0
  • Bit_score: 564
  • Evalue 4.70e-158

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1725
ATGCTCGGGGCCATGTACGCCGAGTTTTTCGGGCTCCAGAGCGACCCGTTTTCGATCGCGCCCGACCCCCGCTACCTGTTCATGAGCGAGCGCCACCGCGAAGCGCTCGCTCATTTGCTCTATGGCGTGCGGGGCGGTGGCGGCTTCGTGCTGCTCAGCGGCGAGATCGGCGCCGGCAAGACCACCATCTGCCGCTGTTTCCTGGAGCAGGTGCCCGAGAACTGCAACGTCGCGTACATCTTCAATCCGCGCCTGACGGTCGCGGACCTGCTCAAGTCCATCTGCCGCGAGTTCCGCATTGAGGTCAAGCACGAGGGCCTGGGCCCGGCCACGGTGCACGACCACCTCGATCCGCTCAACGAATTCCTGCTGGCCAGCCACGCGCGCGGCGAGCGCAACCTGCTCATCATCGACGAGGCGCAGAACCTCACGCCCCATGTGCTGGAGCAGCTGCGCCTGCTCACCAACCTGGAAACCAGCGAGCGAAAGCTGCTGCAGATCATCCTCATCGGCCAGCCCGAGCTGCGCGGCATCGTGGCGCGGCCCGAACTGGAGCAGTTGGCCCAACGCGTGATCGCGCGCTTCCACCTCGACGCCCTGGACGCCGCCGAGACACGCCAGTACATCCAGCACCGCCTGCAGGTGGCCGGCCTCAAGGGGCCGCTGCCGTTCTCGCCAGCCGCCATCGAACGCATCCATGAGCTGTCGCGCGGTGTGCCGCGCCGCATCAACCTGCTGTGCGACCGCGCCCTGCTCGGCGCCTACGCGAACGGGCAGAGCCGCGTCGAACGCACGGTGGTCGACAAGGCCGCCGGCGAGGTGTTCGACGGCGCCGGCTTCCCGCCACCGCCCCGGCGTGCCCGTCCGATGGGTGCCGCGCGTCCCACCGGCCTGGGCACTGCGGGCATGGGCGCATTGGCCGGCGCTGTGGTGGGCGCCTTGGTCGCCGCCGCGGTGCTGTGGTTCTGGCTGCAGCGGTCGGGCACGCCGGCCGCCGCCGGGCCCGCCGCCCCAGTGGCCGCCGCCCCGGTCGCCCCTCCCGTCACCGACCACCCCGCGGCAGCGCCCGCCATCAGCCCCAGCGCCCCGCCCGACCCCGCCACGACCCGCGATCCCGCCCCCACCTCCGGCTGGCCCGCTGGCGATACCCTGCTGGCCACCGAGGCCGAGGCCTGGCGCGAACTGGCCCCGCTGTGGGGCGCCGCGCTGGCCGACAGCGGCGACCCCTGCGAACACGCGCTGGCCGGCGGTCTGCAGTGCTACCGCACCTCGCGCATGACCGTGCATGGCCTGCGCCAGCTCGACCGCCCCGGCATCTTGAACCTGCGCCTGCCCGGCGGCGACAGCGGCCGGCTGCTGCTCACCTCCCTCGACGCGGACAGCGCCGTGCTGGCACGCGGTGAGCGCCGCTGGCGCGTGCCCCTGACCGAACTGGCCGACGCCTGGCGCGGCGACTACGCCACGCTGTGGCGCCTGCCCCCCGGCCACACCGGCCGCCTGGCCGATGGCCGCGACGGCCCGGCTGGCCGCTGGCTCGGCGAGCGCATCGCGGCCTTGCAGGCCAGTGGCCGGGTGCCCGTCTCGGGCCAGGATCTGGCGGCGCGCCTGCTGGCCTTCCAGCGCGCGCAGGGCATCGACGCCGGCGGCCCGGCGGGCCCGGTGACCTTCATGCAAATCAACCTGGCCAGCGGGGTGGATGAGCCCCGGCTGCTGCCCCGCTCCTGA
PROTEIN sequence
Length: 575
MLGAMYAEFFGLQSDPFSIAPDPRYLFMSERHREALAHLLYGVRGGGGFVLLSGEIGAGKTTICRCFLEQVPENCNVAYIFNPRLTVADLLKSICREFRIEVKHEGLGPATVHDHLDPLNEFLLASHARGERNLLIIDEAQNLTPHVLEQLRLLTNLETSERKLLQIILIGQPELRGIVARPELEQLAQRVIARFHLDALDAAETRQYIQHRLQVAGLKGPLPFSPAAIERIHELSRGVPRRINLLCDRALLGAYANGQSRVERTVVDKAAGEVFDGAGFPPPPRRARPMGAARPTGLGTAGMGALAGAVVGALVAAAVLWFWLQRSGTPAAAGPAAPVAAAPVAPPVTDHPAAAPAISPSAPPDPATTRDPAPTSGWPAGDTLLATEAEAWRELAPLWGAALADSGDPCEHALAGGLQCYRTSRMTVHGLRQLDRPGILNLRLPGGDSGRLLLTSLDADSAVLARGERRWRVPLTELADAWRGDYATLWRLPPGHTGRLADGRDGPAGRWLGERIAALQASGRVPVSGQDLAARLLAFQRAQGIDAGGPAGPVTFMQINLASGVDEPRLLPRS*