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scnpilot_p_inoc_scaffold_1818_22

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 20843..21103

Top 3 Functional Annotations

Value Algorithm Source
Putative sigma factor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIL0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 87.0
  • Bit_score: 173
  • Evalue 9.50e-41
Putative sigma factor {ECO:0000313|EMBL:EIK89050.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. P similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 87.0
  • Bit_score: 173
  • Evalue 1.30e-40
putative sigma factor similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 87.0
  • Bit_score: 123
  • Evalue 2.40e-26

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATGCACAGTGCCATCCACCAGCGCATCGCCGCCACCTGGCGACTGGAGTCGGCCCAGGTGGTGGCGGCCGTCATGCGCCGCGTGCGCGACCTCGGCGTGGCCGAGGACATCGCACAGGACGCGCTGGTGGCGGCCCTGGAGCACTGGCCGAAGGACGGCATCCCCGACAAGCCCGGGGCCTGGCTGATGCGCACCGCGCTCAACCGCGCGCTCGACCACCTGCGCCAGCGCGCCACGCGCGAGGGGCACGAGGCCGACATC
PROTEIN sequence
Length: 87
MHSAIHQRIAATWRLESAQVVAAVMRRVRDLGVAEDIAQDALVAALEHWPKDGIPDKPGAWLMRTALNRALDHLRQRATREGHEADI