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scnpilot_p_inoc_scaffold_1830_6

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 4898..5710

Top 3 Functional Annotations

Value Algorithm Source
Transcription negative regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKF8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 270.0
  • Bit_score: 535
  • Evalue 3.90e-149
  • rbh
Transcription negative regulator {ECO:0000313|EMBL:EIK89698.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogeno similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 270.0
  • Bit_score: 535
  • Evalue 5.40e-149
anti-ECFsigma factor ChrR similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 250.0
  • Bit_score: 188
  • Evalue 3.30e-45

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGAACGCTGTCCACGAACCGCAGAAGGGCCAAAGCGCCGGCTGGATGCCTGGCCATCAGGCGCTGCCCGGCGTGTACGCCTACGACCTGGAGAGCCTGCCCTGGCGCACCACGCCGCGCGGCACCGCGCGCGAGAAGGCGGTGCGCCGCGACGAAGCCGCGGGCCTGTTCCTCGGGATGATCGCCTTCGATCCCATGAGCCGATCGGGCGTGCACCAGCACCGGGGTACCGCGAGCAGCTACTTCCTGTCGGGCGAGCTGGTCGATTTCCAGTGCACCACGCGCGCGGGCGCGGTGGGCATCAACCTGGCGGGTGCCACGCACGACGCGGTGACCTACGGCGGCTGCACGTTGTTCTCGCGCCTGGAGGCGCCGGTGACCATCGAGCCCGATGGCGCGGCGATCCACCCGCACGCGAAGAAGACCACGGTGGTCAACGAATCGCCGTTCACGCCCCCGGACATCACCGTGGTGCTCGACGAGGTGGTGCCGGTGGCTTCGCCGTTTGCGCGGGTGTCGCGCCGCGCGGTGTTCGACTACGCGGGCACGGGCCACAACCGGCGCCTGTGCATGTTGCAGCTGTGGCCCGGCGCGCACCTGCCCGATCTGCAGCACCAGGGCCTGACCGACTGGTTCGTGATGGCGGGCGACCTGCGCATCGGCGACACGCGCGTGGCGGGGCCGTCGGTGGTGGTGATCGAACCGGGGTCGCGCGTGGACGTGTCGTCCACCTTCGGCTGCTCCTTGCTGGCCTGGGCCGAGGCGCCCGCGCACGCGGGCGGCGATCCGGCGCTGGAGCCTTACGGCTTCTGA
PROTEIN sequence
Length: 271
MNAVHEPQKGQSAGWMPGHQALPGVYAYDLESLPWRTTPRGTAREKAVRRDEAAGLFLGMIAFDPMSRSGVHQHRGTASSYFLSGELVDFQCTTRAGAVGINLAGATHDAVTYGGCTLFSRLEAPVTIEPDGAAIHPHAKKTTVVNESPFTPPDITVVLDEVVPVASPFARVSRRAVFDYAGTGHNRRLCMLQLWPGAHLPDLQHQGLTDWFVMAGDLRIGDTRVAGPSVVVIEPGSRVDVSSTFGCSLLAWAEAPAHAGGDPALEPYGF*