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scnpilot_p_inoc_scaffold_2585_18

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(17630..18658)

Top 3 Functional Annotations

Value Algorithm Source
rRNA pseudouridylate synthase F n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQC1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 261.0
  • Bit_score: 438
  • Evalue 6.30e-120
  • rbh
rRNA pseudouridylate synthase F {ECO:0000313|EMBL:EIK91411.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenop similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 261.0
  • Bit_score: 438
  • Evalue 8.80e-120
pseudouridine synthase Rsu similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 358.0
  • Bit_score: 396
  • Evalue 1.00e-107

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGGCATCCGATCCCCCCAAGCGAACGCTCAAGCTCAAGCCCGCGGCTCCCAAGCCCCCGGCCGATCCGCGCGCGCCCCGCCGCCCGCCGGTGCGGCCCCCCGGCCCGGCCCGCGCCCGCCCCCTGAGCAGCGCGCAGCGGCCCGAACTGCCCGTGCAGCCCGCGGCCACCGCCACGGCCCCCCGGGCCAGCGAGCCCGGCAAGGCGCCCCGCCGCGACGCCGCCCCACCTCCCGCGCCCGCCACGCCCCGCGACGGCACGCGCCTCAACAAGCGCCTGGCCGAGCTGGGCCTGTGCTCGCGCCGCGAGGCCGACGAGTGGATCGCCAATGGCTGGGTCAGCGTGGACGGCGCCGTGGCCGCCATAGGACAGGCGGTGGGGCCCGGCGCCCGCATCGAGGTGCTGCCCGCCGCGCAAAGGGCCCAGGGCGAGCGCGTCACCATCCTGCTGCACAAGCCCGTGGGCTATGTGAGCGGCCAGCCCGAGGACGGCCACGAGGCCGCCGTCGTGCTGCTGAACGCCAGGACCCACTGGAAGGACGACCGCAGCCCGCGCCGCTTCTCGCCCGCGCAGCTCAAGGGCCTGGCGCCGGCCGGCCGGCTCGACATCGACTCCACCGGCCTGCTCGTGCTCACGCAGGACGGGCGGGTCGCCCGCGCCCTTATCGGCGAGGACAGCGAGGTGGAGAAGGAGTACCTGGTGCGCGTGGTGTGGGCGCCGCACGGGCCGAAAGGGCCGGGCGTGGTCGAGCAGGACGTGCAGGCCGTGTTCCCCGCCGAACGACTGGCGCGGCTGCGCCACGGCCTGTCGCTCGATGGCCAGCCGCTCAGGCCCGCGGGCGTGGACTGGCTCAACCCCGAGCAGCTGCGCTTTGTGCTCACCGAGGGCAAGAAGCGCCAGATCCGCCGCATGTGCGAGGCGGTGGGCCTGCATGTGGTGGGCCTCAAGCGCGTGCGCATCGGCCGCGTGGCCCTGGGCCAGCTGCCCCAGGGGCAGTGGCGCTACCTGCTTCCCGACGAAGTGTTCTGA
PROTEIN sequence
Length: 343
MASDPPKRTLKLKPAAPKPPADPRAPRRPPVRPPGPARARPLSSAQRPELPVQPAATATAPRASEPGKAPRRDAAPPPAPATPRDGTRLNKRLAELGLCSRREADEWIANGWVSVDGAVAAIGQAVGPGARIEVLPAAQRAQGERVTILLHKPVGYVSGQPEDGHEAAVVLLNARTHWKDDRSPRRFSPAQLKGLAPAGRLDIDSTGLLVLTQDGRVARALIGEDSEVEKEYLVRVVWAPHGPKGPGVVEQDVQAVFPAERLARLRHGLSLDGQPLRPAGVDWLNPEQLRFVLTEGKKRQIRRMCEAVGLHVVGLKRVRIGRVALGQLPQGQWRYLLPDEVF*