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scnpilot_p_inoc_scaffold_1992_4

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 1753..2238

Top 3 Functional Annotations

Value Algorithm Source
Putative TRAP-type C4-dicarboxylate transport system, small permease subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPP7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 161.0
  • Bit_score: 284
  • Evalue 5.50e-74
Putative TRAP-type C4-dicarboxylate transport system, small permease subunit {ECO:0000313|EMBL:EIK91187.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 161.0
  • Bit_score: 284
  • Evalue 7.60e-74
TRAP C4-dicarboxylate transport system permease DctM similarity KEGG
DB: KEGG
  • Identity: 51.0
  • Coverage: 153.0
  • Bit_score: 177
  • Evalue 2.60e-42

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGCGCCTGCTCGCGCGGGCGGCCGAGGCCGTGGCCGCCCTCCTTCTCGGCGTGATCTTCCTCGCCTTCATCCTGCAGATCGCGCTGCGCTACCTGTTCGATCTGCCGGTGGGCTGGACGGCCGAAATCTCGCTCGTCGCCTGGCTCTGGCTGATCCTGTGGGGCGCGGCCTTCGTGCTCAGGGACGAGGAGGAAATCCGTATCGACCTGCTCAAGGCGCTGTTCGGCCCGCGCGGGCAGCGCGTGCTGGCGTCCATCGGTTCCATCGCCACCGTCGCGCTGTTCGCACTGGCCATGCCCGCCACCTGGGACTACGTGAGCTTCATGAAGGTGGAGAGCAGCTCATACCTGAAGATCCGCTTCGACTGGCTGTACTCGATCTACCTCGTGTTCGCCGCCGCCGTCATCGCGCGCCACCTGTGGCTGATCGTGAACGCCCTGCGCGGACGCTCGTCGGCCGACCCCACGCACATAGGTTCCCTGTGA
PROTEIN sequence
Length: 162
MRLLARAAEAVAALLLGVIFLAFILQIALRYLFDLPVGWTAEISLVAWLWLILWGAAFVLRDEEEIRIDLLKALFGPRGQRVLASIGSIATVALFALAMPATWDYVSFMKVESSSYLKIRFDWLYSIYLVFAAAVIARHLWLIVNALRGRSSADPTHIGSL*