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scnpilot_p_inoc_scaffold_1992_6

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 3556..4452

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 275.0
  • Bit_score: 370
  • Evalue 3.90e-100
Shikimate dehydrogenase substrate binding domain protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPP9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 291.0
  • Bit_score: 522
  • Evalue 3.70e-145
  • rbh
Shikimate dehydrogenase substrate binding domain protein {ECO:0000313|EMBL:EIK91189.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenoph similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 291.0
  • Bit_score: 522
  • Evalue 5.30e-145

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGACCGTGCCCCGCATCGACGGCCACACCCGGGTGATCGCCCACCTCGGCCACCCCACGCACAGCTTCAAGGCGCCGCTCATCTACAACCCCTGGTTCGCGGCCAGCGGCACCAACGCGGTGGTGGTTCCCATCGACTGCCCGGCCGGCGCGCTCGACTCGCTGCTGCCGCCGCTGATGGCCGCGCCCAATGTGCTGGGCGCGCTCATCACCATGCCGCACAAGGTGGGCGTGGTGGCGCTGCTCGACGAGGTCTCGCGCACCGCGCGCGTGGCCGGCGCCTGCAATGCCGTGAAGCGCGCGGCCGACGGCCGCCTCATCGGCGACCTGTTCGATGGCGAGGGCTTCGTGCGCGGCGTGCAGCGCAAGGGCCTCGTGCTCAAGGGCGCCAGCGCGCTGGTGGTGGGCAGCGGCGGCGTGGGCTCGGCCATCGCCGCCTCGCTGGCGGCGGCCGGTGTGGCGCATTTGGCGCTGTTCGACACGAACGGCACGGCCAGCGAAACCCTGAGCCAGCGCCTGCGCGCGGCCTATCCCTTGCTGCAGATCAGCACCGGCAAAAGCGACCCGGCGGGCCTCGATCTCGTGGTCAACGCCACGCCACTGGGCATGGCGCCCGGCGATCCGCTGCCACTGGACGTGGACCGACTCGACGCGCGCACCTTCGTTGGCGAGGTGGTGATGCGCGAGCGCGTCACCGCTTTCCTGTCGGCCGCGCAGGCGCGCGGCTGCCGCGTGCAGGTGGGCACCGACATGCTCTTCGAGCAGATCCCCGCCTACCTCGAATTCTTCGGCCTGCCCGTGGCCACGCCCGAACGTCTGCGTGAGCTCGCGGCGCTCGATGGGCCGCCCGCCGCCCCCAGAGCGTCACCACCGCCGCGCGCGAGCGGGGCGCGCTGA
PROTEIN sequence
Length: 299
MTVPRIDGHTRVIAHLGHPTHSFKAPLIYNPWFAASGTNAVVVPIDCPAGALDSLLPPLMAAPNVLGALITMPHKVGVVALLDEVSRTARVAGACNAVKRAADGRLIGDLFDGEGFVRGVQRKGLVLKGASALVVGSGGVGSAIAASLAAAGVAHLALFDTNGTASETLSQRLRAAYPLLQISTGKSDPAGLDLVVNATPLGMAPGDPLPLDVDRLDARTFVGEVVMRERVTAFLSAAQARGCRVQVGTDMLFEQIPAYLEFFGLPVATPERLRELAALDGPPAAPRASPPPRASGAR*