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scnpilot_p_inoc_scaffold_2199_4

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(4352..5329)

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter solute receptor TAXI family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSH5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 325.0
  • Bit_score: 515
  • Evalue 5.00e-143
TRAP transporter solute receptor TAXI family protein {ECO:0000313|EMBL:EIK92165.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga. similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 325.0
  • Bit_score: 515
  • Evalue 7.00e-143
TRAP-type uncharacterized transport system, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 327.0
  • Bit_score: 502
  • Evalue 1.20e-139
  • rbh

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGAAAAAACTCACCGCCTGTCTCAGCGCCGTGGCCGCATCGGCCGCGATGATGGCGCCCGCCGCCCCCGCCTTCGCCCAACAGAAGTTCATGACCATCGGTACCGGTGGCGTGACCGGCGTGTACTACGCCGCGGGCGGCGCCATCTGCCGCCTGGTGAACAAGGACCGCGCCAAGCACGGCTTCCGCTGCACGGTGGAGTCCACGGGTGGCTCCGTCGCCAACATCAACACCATCAAGGCAGGCGACCTCGACTTCGGCGTGGCGCAGTCCGACTGGAACCACCACGCCTACAAGGGCACCAGCACGTTCCAGAAAGACGGTGCCTTCAGCGACCTGCGCTCCGTGTTCTCGCTGCACCCCGAGCCCTTCACCGTGCTCGCCCGCGCCGACGCCAACGTCAAGAACTTCAGCGAACTCAAGGGCAAGCGCGTGAACGTGGGCAATCCCGGTTCCGGCACCCGCGCGTCCATGGAGCAGCTGCTGACGGCCATGAACTGGAAGCTCAGTGACTTCGGTCTGGCGGCCGAGCTCAAGGCCGACGAGCACGGCGCCGCGCTGTGCGACAACAAGATCGACGCCTTCTTCTACGGCGTGGGCCACCCGAGCGCCAACATCCAGGACCCGGTCACGACCTGCGGCGCCAAGCTGGTGAACATCTCCGGCCCGGCCGTGGACAAGCTGGTGGCCGAGTTCCCGTTCTACGCCAAGGCCGTGATCCCCGGCGGTCTGTACAAGGGCAATGACCAGGACACGAACACCTACGGCGTGCTGGCGACCTTCGTGACCTCGGCCAAGGCCTCGGACGATCAGGTCTACACCCTGGTGAAGGCGGTGTTCGACAACTTCGACGAATTCAAGAAGCTGCACCCTGCCTTTGCCAACCTGAAGGCCGAGAACATGGTCAAGGATGGCCTGAGCGCACCGCTGCACCCCGGTGCCGCCAAGTACTACAAGGAAAAGGGCTGGATCAAGTAA
PROTEIN sequence
Length: 326
MKKLTACLSAVAASAAMMAPAAPAFAQQKFMTIGTGGVTGVYYAAGGAICRLVNKDRAKHGFRCTVESTGGSVANINTIKAGDLDFGVAQSDWNHHAYKGTSTFQKDGAFSDLRSVFSLHPEPFTVLARADANVKNFSELKGKRVNVGNPGSGTRASMEQLLTAMNWKLSDFGLAAELKADEHGAALCDNKIDAFFYGVGHPSANIQDPVTTCGAKLVNISGPAVDKLVAEFPFYAKAVIPGGLYKGNDQDTNTYGVLATFVTSAKASDDQVYTLVKAVFDNFDEFKKLHPAFANLKAENMVKDGLSAPLHPGAAKYYKEKGWIK*