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scnpilot_p_inoc_scaffold_2199_11

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(13329..14789)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane channel (Fragment) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSI1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 452.0
  • Bit_score: 795
  • Evalue 2.90e-227
  • rbh
Outer membrane channel {ECO:0000313|EMBL:EIK92171.1}; Flags: Fragment;; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="H similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 452.0
  • Bit_score: 795
  • Evalue 4.00e-227
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 470.0
  • Bit_score: 372
  • Evalue 2.20e-100

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1461
ATGAAGCGACTGCTCGTGGCGCTGGCCGCTGGCGCCCTGCTGGGCGCGTGCAGCGTGGGCCGGCCACCGACCGAAGTACCCGTCGACCTGCCTGAGCGCTGGATGGCGCCGCCGCTGGCGCACCAGGGCAGTACCCAGGCGCTGGGCGACTGGTGGGCCCGTTTCGACGACCCGGTGCTCAGCGACTGGATCGCACGCGCCCAGCGCCACAGCCCCGACATCGCGTCCGCCCGGGCCCAGGTGTTCGCGGCGCGCGCCGCGCTGGCCGGCGCCGAGGCGCAGGGCCGCCCCCAGGCGAATGCGGTGGCCATCGCCAGCCGGGGCCGCACCGACGTGAACACGCCCCTGGGCACCACGTTGAGCGCGGGGGTGGAGGCCTCCTGGGCCGTGGGCCTGTGGGGCGAGGGCCAGGGGCGCGTGGACAGCGCGCAGGCCCAACAGGACGCCGCCGGCGCGCGCTGGCACGAGGCCCGCGTGTTGGTCGCCTCCGAGGTGGCGCAGCTCTATTTCGGCCAGCGCCTGTGCCGCGAACAACTGACCGTGGCCCTGAACGACCGCGATTCGCGCCGCGTCACGGCCGACAGCAACGAGGTGACCGAGCGCGCCGGCCTCACCGCGCCCGCCGTGGCGGCGCTGGCGCGCGCCAGTGCCGCCGAGGGCGTGGCGCGCTGGCGCAGCCAGGACGCCCTGTGCGAGCGCCAGGTCAAGTCCATCGCCGCCATCACCGCCCAGCCCGAAGCGGACGTGCGCGCCCAGCTCGGCGGCGCGCCCGACCTCAAGGCCTGGCTCGCCTCCGGCCGGGTCGAGCGGCTGCTGGGCGTGAACGCCGTGCCGGCCGAGGTGCTGCGCCAGCGTCCCGACGTGTACCGCGCCCAGCGCGAGCTGGTGGCCGCCAGCGAGGACGTGGGCGTGGCCCGCGCCGCGCTGCGCCCGGGCCTCACGCTGCAGGGCAGCGTGCTGCGCAACCACTTCTCGGGCGGCGGCCTGGACTTCGCCGCCAATTCCTGGTCCATCGGCCCCATCACCCTGAGCCTGCCCTTGTTGGGGCGCGGCGCCCTGCACGCCAGCGCGGACAGCGCCCAGGCGCGCTACGAGGCCGCCGCCATGGCCTACGCGCGCACGCTGCGCCAGGCCGTGGCCGAGGTGGAGCAGTCGCTGGTCACGCTCTCGGGCCTGAGCGAGCGCCTGGCCGCCACCGAGACCGCGGTGGCCGGCTACAGCCGTTCCTTCGAGGCCACCGAGGCGCGCTACCGCGTGGGCTTCGCCAACCTCAGCGAGCTGGAAGAGGCGCGCCGCCTCAAGCTCAGCGCCGACAGCAGCGCCGTGGCCCTGCAGCAGGAGCGAATGGACGCCTGGCTGCAGCTCTACGTCGCCCTGGGCGGCGGCTTCGATCCCGCCGCGATCCCCGCCACCTACACCGGTGATGCCCTGAATCCCAACGCCTCGAACGACGTCCGATGA
PROTEIN sequence
Length: 487
MKRLLVALAAGALLGACSVGRPPTEVPVDLPERWMAPPLAHQGSTQALGDWWARFDDPVLSDWIARAQRHSPDIASARAQVFAARAALAGAEAQGRPQANAVAIASRGRTDVNTPLGTTLSAGVEASWAVGLWGEGQGRVDSAQAQQDAAGARWHEARVLVASEVAQLYFGQRLCREQLTVALNDRDSRRVTADSNEVTERAGLTAPAVAALARASAAEGVARWRSQDALCERQVKSIAAITAQPEADVRAQLGGAPDLKAWLASGRVERLLGVNAVPAEVLRQRPDVYRAQRELVAASEDVGVARAALRPGLTLQGSVLRNHFSGGGLDFAANSWSIGPITLSLPLLGRGALHASADSAQARYEAAAMAYARTLRQAVAEVEQSLVTLSGLSERLAATETAVAGYSRSFEATEARYRVGFANLSELEEARRLKLSADSSAVALQQERMDAWLQLYVALGGGFDPAAIPATYTGDALNPNASNDVR*