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scnpilot_p_inoc_scaffold_2210_6

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(4258..5550)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 435.0
  • Bit_score: 710
  • Evalue 2.00e-201
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 430.0
  • Bit_score: 505
  • Evalue 1.10e-140
Pseudouridine synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP54_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 435.0
  • Bit_score: 710
  • Evalue 1.40e-201
  • rbh

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1293
ATGAGCCCGGCCACCCCACGCAAACCCCGGCCTGATCGGCCCAGCGCCGCCGGCAAGCCCCGGTCCGATCGGCCGCGCGCCAGCCAGCCGCGCTCCGAAGCGGCGCGCGTCGGCAAGCCGCGCACCGAGCGCCCCCGGCGCGCGGACGCACCCGCGGCCGACGCCGACGCCCTGCGCTTCGACGAGGTCGTCAGCGGCGCCTTCGACGAGGCCCAGTCGCACGCCCCCGAGGCGCCCACCGAGCCGGCCAAGCGCGTGCTCGCGCCCGAGGCCGAATCGCCCAAGCTGCACAAGGTGCTGGCCCAGGCCGGCCTGGGCTCGCGGCTCGAGATGGAGCAGCTCATCGTGCAGGGCCGCCTCTCGGTCAACGGCGAGCCCGCCCACGTCGGCCAACGCATCCAGCACGGCGACCAGATCCGCCTGGATGGCAAGCCCCTGCGCGTGCGCCTGCAGCCGCCAGCACCGCGCGTGCTGGCTTACCACAAGCCGGCTGGCGAGGTCGTCACCCACGATGACCCGCAGAACCGCCCCACGGTGTTCCGCCGCCTGCCGCGCCTGCACCAGGGCAAATGGCAGTCGGTGGGGCGGCTCGACCTCAACACCGAGGGCCTGCTGCTGTTCACCAACGCCGGCGAACTGGCCAACCGCCTGATGCACCCGCGCTTCGGCCTGCAGCGCGAGTACGCCGTGCGCGTGCTCGGCGCCATCTCCAACGAAGAGCGGCAGCGGCTGCTGGACGGCGTCCAGCTGGAAGACGGCATGGCGCAGTTCCAGTCCATCGAGGACGGGGGCGGCGAGGGCGCCAACTGCTGGTACCGCGTCACCATCGGCGAAGGCCGCAACCGCGAGGTGCGCCGCCTGTTCGAGGCCGTGGGCCATGCCGTGAGCCGGCTCATCCGCATCCGCTACGGGGCCGTGGTGCTGCCGCGCGGCCTGCCGCGCGGGGCCTGGATCGAACTGGGCGAGCGCGACGTGCAGCGCCTGGGCCAGGCGGCCGGCCTGGCCGATGCCCCGCCCCGGGGCCCGCGCGGCGACGCCCCGGCCCCAGCCAGCGCGCGCCGTCGCCAGGGGCCGGGCCCCAAATCGCCGCCGCCCAAGCCGTCCGCGCCGCGCCGCGCCGAGGGCGCCGCGGCCCGCGGTCGAAGCGCCGGCGGCCAGCCCGATCCCATGAAGACCAGCCAGGGCTACATCGGCCACGACGCGGTGCAGCGCCAGCGCCGCCAGGGCGGCAAAGCCCCGGGCAAAGGCATCGGCAAACCCCCCCGTCCACAGGGGCGCCGCCCCAGGGGTTGA
PROTEIN sequence
Length: 431
MSPATPRKPRPDRPSAAGKPRSDRPRASQPRSEAARVGKPRTERPRRADAPAADADALRFDEVVSGAFDEAQSHAPEAPTEPAKRVLAPEAESPKLHKVLAQAGLGSRLEMEQLIVQGRLSVNGEPAHVGQRIQHGDQIRLDGKPLRVRLQPPAPRVLAYHKPAGEVVTHDDPQNRPTVFRRLPRLHQGKWQSVGRLDLNTEGLLLFTNAGELANRLMHPRFGLQREYAVRVLGAISNEERQRLLDGVQLEDGMAQFQSIEDGGGEGANCWYRVTIGEGRNREVRRLFEAVGHAVSRLIRIRYGAVVLPRGLPRGAWIELGERDVQRLGQAAGLADAPPRGPRGDAPAPASARRRQGPGPKSPPPKPSAPRRAEGAAARGRSAGGQPDPMKTSQGYIGHDAVQRQRRQGGKAPGKGIGKPPRPQGRRPRG*