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scnpilot_p_inoc_scaffold_2263_5

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(3281..4360)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilM n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRN4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 345.0
  • Bit_score: 653
  • Evalue 9.90e-185
  • rbh
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:EIK91874.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrog similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 345.0
  • Bit_score: 653
  • Evalue 1.40e-184
type IV pilus assembly protein PilM similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 359.0
  • Bit_score: 574
  • Evalue 1.70e-161

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
TTGATCTCACTGGGATCGCTATTCAGCCGAGAGCCAGCGCCGCTGCTGGGCATCGACGTGAGTTCGTCGAGCGTCAAGCTTGTCGAGCTCAGCCGCAACCGCGCCGGCGAGTTCGTGCTGGAGCGCTGCGCCATGGAACCGCTGGAACGCGGCTGGATCACCGACGGCAACATCGAAAAATTCGATGAGGTGGCCGACGCGGTGCGCCGGGTGGTGCGCAAGAGCGGCAGCAAGACGAAGAACGTGGCCCTGGCGTTGCCGGCCTCGGCGGTGATCACCAAGAAAATCGTTCTGCCGGGTGGCATGAGCGACAAGGAGCTCGAGGCGCAGGTCGAGTCCGAGGCCAACCAGTACATCCCGTTCTCGCTCGACGAGGTGAGCCTCGATTTCTGCGTCGTCGGCCCCAGCGCGACGTCCGTGGGCGATGTCGAGGTGCTGATCGCCGCCTCCCGCAAGGAAAAGGTGTCCGACCGGCAAGGCCTGGCCGAAGCCGCGGGTCTCAAGCCCGTGGTCATGGACGTCGAGTCCTATGCGTCGCGGCTGGCCGCCGGCCGCGTGATCGAAACCTTGCCGAACCAGGGGGTGGACGCGCTGGTGGCGCTGTTCGAGATCGGCTCCATGACCACGAGTCTGCAGGTCATTCGCAACGACGAAGTGCTCTACGAGCGCGACCAGGCCTTTGGTGGCGGTCAGCTCACCCAGCTCATCATCCGCCAGTACGGTTTTTCGCCCGACGAGGCCGAAGCCAAGAAGCGCTCGGGTGACCTACCGGAGGACTACCAGAGCGCCGTGCTGGAGCCGTTTATTGAGAGCCTTTCCCAGGAAATCGGCCGCGCGCTGCAGTTTTTCTTCACCAGCACGCCGTACAACAAGATCGACCACATCCTGCTGGCCGGCGGCAGCGCCGCCTTGCTGGGGCTCACCGAGGCGGTGACCCACCAAACCTCGTTCGCGTGCATGCTGATCAACCCGTTCGACGCGATGGAACTGGGGGCGGGTGTTCAGGCGCGAAAGATCTCACGTGAGGCGCCGGCCTACCTGACGTCCACCGGGCTGGCGCTGCGGAGGTTCTACCAATGA
PROTEIN sequence
Length: 360
LISLGSLFSREPAPLLGIDVSSSSVKLVELSRNRAGEFVLERCAMEPLERGWITDGNIEKFDEVADAVRRVVRKSGSKTKNVALALPASAVITKKIVLPGGMSDKELEAQVESEANQYIPFSLDEVSLDFCVVGPSATSVGDVEVLIAASRKEKVSDRQGLAEAAGLKPVVMDVESYASRLAAGRVIETLPNQGVDALVALFEIGSMTTSLQVIRNDEVLYERDQAFGGGQLTQLIIRQYGFSPDEAEAKKRSGDLPEDYQSAVLEPFIESLSQEIGRALQFFFTSTPYNKIDHILLAGGSAALLGLTEAVTHQTSFACMLINPFDAMELGAGVQARKISREAPAYLTSTGLALRRFYQ*