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scnpilot_p_inoc_scaffold_2272_12

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(11243..12505)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=795665 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 420.0
  • Bit_score: 816
  • Evalue 1.90e-233
Transcription termination factor Rho n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQ40_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 420.0
  • Bit_score: 816
  • Evalue 1.40e-233
  • rbh
transcription termination factor rho similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 420.0
  • Bit_score: 766
  • Evalue 3.50e-219

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGCACCTGAACGAACTCAAGGCCCTGCACGTTTCCGAAGTGGTCAAGCAGGCCGAAGCGCTCGAAATCGAAAACACCGGCCGCATGCGCAAGCAGGAGCTGATGTTCGCCATCATCAAGAAGCGCGCGAAAGCCGGCGAACAGATCTTCGCTGACGGCGTGCTCGAGGTCCTGCCGGACGGCTTCGGCTTCCTGCGCGCGCCGGACACCAGCTACACGGCCAGCACCGACGACATCTACATCTCGCCCAGCCAGATCCGCCGCTTCAACCTGCACACCGGCGACATGATCGAGGGCGAGGTCCGCATCCCCAAGGACGGCGAACGCTACTTCGCCCTCAACAAGCTCGACAAGATCAACGGCCTGGCTCCCGAGGAGAACAAGCACAAGATCATGTTCGAGAACCTGACGCCGCTGTTCCCCAAGGAGCAGATGCGCCTGGAACGCGACATCAAGAGCGAAGAGAACATCACCGGTCGCATCATCGACATCATCGCGCCCATCGGCCGCGGCCAGCGCGCGCTGATCGTCGCCCCGCCCAAGAGCGGCAAGACGGTGATGATGCAGCACATCTGCCACGCCATCACCGCCAACCACCCCGACGTGGAGCTCATGGTCCTGCTGGTGGACGAGCGCCCCGAGGAAGTGACCGAAATGCAGCGCACCGTGCGCGGCGAGGTCATCGCCTCCACCTTCGACGAACCGGCCGCCCGCCACGTGCACGTGGCCGAGATGGTGATCGAGCGCGCCAAGCGCCTGGTCGAGCTCAAGAAGGACGTGGTGATCATGCTCGACTCGATCACCCGCCTGGCCCGCGCCTACAACAACGTGCTGCCCTCCTCGGGCAAGGTGCTCACCGGCGGCGTGGACGCCAACGCCCTGCAGCGGCCCAAGCGGTTCTTCGGCGCGGCGCGCAAGGTGGAGGAAGGCGGTTCGCTCACCATCATCGCCACCGCCCTGGTCGACACCGGCTCGCGCATGGACGAGGTGATCTTCGAGGAGTTCAAGGGCACCGGCAACTGCGAGATCCACCTCGACCGCCGCCTGTACGAAAAGCGCGTCTTTCCCTCCATCCAGCTCAACCGCAGCGGCACCCGCCGCGAAGAGCTGCTGCTGCAGCCCGAGATCCTGCAGAAGACCCGTATCCTGCGCCAGTTCATGTACAACATGGACGAGATCGAGGCCATGGAAATGGTCCTCAAGAGCATGAAGGCCACGAAGAACAACTCCGAGTTCTTCGACATGATGCGCCGAGGCGGGTAA
PROTEIN sequence
Length: 421
MHLNELKALHVSEVVKQAEALEIENTGRMRKQELMFAIIKKRAKAGEQIFADGVLEVLPDGFGFLRAPDTSYTASTDDIYISPSQIRRFNLHTGDMIEGEVRIPKDGERYFALNKLDKINGLAPEENKHKIMFENLTPLFPKEQMRLERDIKSEENITGRIIDIIAPIGRGQRALIVAPPKSGKTVMMQHICHAITANHPDVELMVLLVDERPEEVTEMQRTVRGEVIASTFDEPAARHVHVAEMVIERAKRLVELKKDVVIMLDSITRLARAYNNVLPSSGKVLTGGVDANALQRPKRFFGAARKVEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNCEIHLDRRLYEKRVFPSIQLNRSGTRREELLLQPEILQKTRILRQFMYNMDEIEAMEMVLKSMKATKNNSEFFDMMRRGG*