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scnpilot_p_inoc_scaffold_1872_7

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(8360..9022)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSR9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 207.0
  • Bit_score: 386
  • Evalue 1.40e-104
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EIK92259.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga s similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 207.0
  • Bit_score: 386
  • Evalue 1.90e-104
bacterial regulatory s, tetR family protein similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 197.0
  • Bit_score: 144
  • Evalue 3.40e-32

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGACCAGAACGCGGGCGGACGACTATGAGGACAAGAAGGCCACCATCCTGGACAAGGCCGCCGCGCTGATCGCGCGCAAGGGCTTCGACCAGGCGACCATGCAAGACGTGGCCAAGGCCTGCGGCACCTCCAAGTCGCACATCTACCACTACTTCCCGAGCAAGGAAGAGCTGCTCTACGCCATCGTGCACGACCACATCACGCGCCAGGCCGAGGACCTGACGCGCATCGTGGCGCAGCCGCTGCCGGCCGAGGTGCGCTTCCAGCAGTTCGTGGAGAGCTTCATGCAGGGCGCGGCGCGCGAGCGCGACGAGCACATCATCCTGATGAACGACCTGAAGTACCTGCCGCGCGCGGAGCTGCGCACCATCCGCTCACTGGAGAGCAGCATGACCGAGCTGCTCAACGGCCTGCTGGAGGAACTCAACCCCGGCCTGATGGAAACCGCACGCGTGCGCAAGCCTTACGCGCTGCTGCTCTTCGGCATGATGATCTGGACCTTCAGCTGGTACCGGCCCTCGGGCGACATCGGCCCGAAGGAGCTGGCGGCGCGCATCTCGCACCTGTTCGTGCACGGGTTCAAGGCGCCGCCGGCGAACGCCTTCAGTTCACCGAGCGCTTCTTCCCCTGCCAGTAAGGCTCGCGCAGCACGTTCTTCATGA
PROTEIN sequence
Length: 221
MTRTRADDYEDKKATILDKAAALIARKGFDQATMQDVAKACGTSKSHIYHYFPSKEELLYAIVHDHITRQAEDLTRIVAQPLPAEVRFQQFVESFMQGAARERDEHIILMNDLKYLPRAELRTIRSLESSMTELLNGLLEELNPGLMETARVRKPYALLLFGMMIWTFSWYRPSGDIGPKELAARISHLFVHGFKAPPANAFSSPSASSPASKARAARSS*