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scnpilot_p_inoc_scaffold_3011_2

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 334..921

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator (Fragment) n=1 Tax=uncultured bacterium RepID=K1ZRQ7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 188.0
  • Bit_score: 262
  • Evalue 4.60e-67
TetR family transcriptional regulator {ECO:0000313|EMBL:EKD40359.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 188.0
  • Bit_score: 262
  • Evalue 6.40e-67
putative membrane protein similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 185.0
  • Bit_score: 237
  • Evalue 4.40e-60

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 588
ATGGATGTGACCGACTACCCCGAGTTGCCGCAGCGGGCGCGCATCGTGAAGATCGCGGCCCAGCTGTTCGCGCAGCGCGGGTACCACGCGGTCGGCATGAGCGACATCCAGGAAGCGGTGAAGCTCGGCCGCGGGGCGCTCTACCACCACATCCGCAGCAAGGAAGACCTGCTGTACGACGTGACCCGTGAGTACATCACCGAGCTGGCCGACAGCGCGCTGCGCCTCAAGGCCGAGGAAAGCGACCCGGTCGCGCGGCTGACCCGGCTCGGCTCGGTCCTGGTGCACAAGGTGGCCTCGCACCAGGCCGAGCTGACGGTCTGCTTCCGGGACGTTCAGTCGCTCTCCACCGAACGCTGCAACGAGGTCATGGGCTGGCACGGCCGCTACGAACAGGTGTGGCGCGACACCATGATCGAAGGCGCGGAACAAGGCGTGTTCCGGCCCTTCGATGCGCTCGTGCTCAAGGGCGTGCTGGGCATGTACTACTACTGCTACCTCTGGATGAAGCCGCAACGGCCCGAGGGCGCGCAGGCCATCGCTGAGCGCTTCAACGACCTGACGCTGCGCATGCTGCGCGCCACCTGA
PROTEIN sequence
Length: 196
MDVTDYPELPQRARIVKIAAQLFAQRGYHAVGMSDIQEAVKLGRGALYHHIRSKEDLLYDVTREYITELADSALRLKAEESDPVARLTRLGSVLVHKVASHQAELTVCFRDVQSLSTERCNEVMGWHGRYEQVWRDTMIEGAEQGVFRPFDALVLKGVLGMYYYCYLWMKPQRPEGAQAIAERFNDLTLRMLRAT*