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scnpilot_p_inoc_scaffold_2368_5

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(2130..3500)

Top 3 Functional Annotations

Value Algorithm Source
Putative GAF sensor protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT31_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 456.0
  • Bit_score: 767
  • Evalue 6.00e-219
  • rbh
Putative GAF sensor protein {ECO:0000313|EMBL:EIK92371.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 456.0
  • Bit_score: 767
  • Evalue 8.40e-219
GAF sensor protein similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 460.0
  • Bit_score: 486
  • Evalue 7.50e-135

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGAACGCCACAGCCGCCATCGGTCCCGAGCAGCTCGCCACCATGGCCGAACTCAGGCCCTGTCTGGAAGGCGCGATCCCCGCCGTGATGGCCACCGTGGCGGCCGATGGCACGCCCAACGTGGCGTACCTGTCCCAGGTGCACCATGTGGACGAGCACCACGTGGCGCTGTCCTTCCAGTTCTTCAATCGCACCCGGCAGAACCTGCTGGCGCATCCGCGCTCCACGGTGCTGGTGACCAACCCGCTGAATTTCCACTTCTACCGCCTGCACCTGAAGTACCTGCGCACGGAAGACGAGGGGCCGGTGTTCGAGCGCATGAAAGCGCAGTTGGCGGGCATCGCCTCGCACGAGCGCCTGGAAGACGTGTTTCGCCTGCGCGGCGCCGACATCCACCAGGTGCTGGCCATCGAGCGCGTGCCGGTGGGCAAGGCCCCGCCCTTGCCCGCGCCGCTGAGGCGGCCCGAGCCCCTGGCGGTGCTGCGCCGCCTCAGCGGGCGTTTGTCCCGTGCGCGCACGCTCGATGCGCTGCTGGATGCCGCCCTCGATGGACTGCAGCAGGAGCTGGGCCTGTCGCAGGCCATGGTGCTGATCGCCGACACCGCCTCGGGGCGGCTCTACACCGTGGGCAGCCGGGGGTACCCGACCTCGGGCGTGGGCTCGGAAATCGCGGTGGGCCACGGGGTCATTGGCGTGGCCGCGCGCGAAGGCACGCCGGTGCGCATCAATCACATGACGAGCGCCGCGCGCTACAACCAGGCCCTGGCCGACAGCCTGGGCCGGCGCGAAGCGGGCGCCGAGATTCCTTACCCCGGCTTGGCCCGGCCGGGCAGCCAGCTCGCCGTGCCGCTGCTGTCCGCCGGCCGGGTCCTGGGGGTGCTGTTCGTGGAAAGCGAGCACGAGATGCACCTGAACCACGAAGACGAGGACCTGCTGGTCGCGCTCGCGGGCCAATTGGCGGCGGGCATCGACCTGATGCACGAGTCCGAGGAGCCTTGCGGCGACGACGGCGCGGCGGCCGCCAGCGCGGCGGTGGCCGCCAGCGCGGCCCCCTTGCTGCGCGTGCGCCGCTACCGGCGCGACGACAGCATCTTCGTCAACAACGCCTACCTCATCAAAGGCGTGGCCGGCGCCATCCTGTGGAAGCTGCTGAACGACCACCTCGGCGGCCGCAGCGAGTTCACCAACCGCGAGTTGCGCCTGGACACCACGCTGGGCCTGCCGGACGTGAGCGACAACCTGGAGGCGCGCCTGCTGCTGCTGCACCGCCGCCTGGGCGAGCAGTGCCCGGCGCTGCGGCTGCAGAAGACCGGGCGCGGCAGCTTCCGCTTCGACGCCCTCGCGCCGGTGGAGCTGGCCGAGAGCCCCTAG
PROTEIN sequence
Length: 457
MNATAAIGPEQLATMAELRPCLEGAIPAVMATVAADGTPNVAYLSQVHHVDEHHVALSFQFFNRTRQNLLAHPRSTVLVTNPLNFHFYRLHLKYLRTEDEGPVFERMKAQLAGIASHERLEDVFRLRGADIHQVLAIERVPVGKAPPLPAPLRRPEPLAVLRRLSGRLSRARTLDALLDAALDGLQQELGLSQAMVLIADTASGRLYTVGSRGYPTSGVGSEIAVGHGVIGVAAREGTPVRINHMTSAARYNQALADSLGRREAGAEIPYPGLARPGSQLAVPLLSAGRVLGVLFVESEHEMHLNHEDEDLLVALAGQLAAGIDLMHESEEPCGDDGAAAASAAVAASAAPLLRVRRYRRDDSIFVNNAYLIKGVAGAILWKLLNDHLGGRSEFTNRELRLDTTLGLPDVSDNLEARLLLLHRRLGEQCPALRLQKTGRGSFRFDALAPVELAESP*