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scnpilot_p_inoc_scaffold_2368_24

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 19547..20107

Top 3 Functional Annotations

Value Algorithm Source
Peptidoglycan-binding LysM n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT49_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 186.0
  • Bit_score: 344
  • Evalue 5.10e-92
Peptidoglycan-binding LysM {ECO:0000313|EMBL:EIK92389.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 186.0
  • Bit_score: 346
  • Evalue 3.20e-92
peptidoglycan-binding LysM similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 186.0
  • Bit_score: 250
  • Evalue 4.80e-64

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
GTGTTCCGCAACGCCACGCCGCTGCGCGACCCCATCACCAACGAAATCCTGGGCTACGAGGCGCAGTACGTGGGCAAGGCCAACGTGGTCTCCAACGAACGCCGCCGCGAAGGCGTGGACGCCAAGGGCGACAAGGTCGAGGAAATCGTGCCGGCCGGCATCGACATCGTCGCCGCAAAGGAGGAAATGCGCGTGGGCGACCGCCTGCTGCCCGAGCCTCCGCGCGAGTTCCTCAATTTCGTGCCGCGCGCGCCGCAGGGCCCGCAATCCGGCCACGTGGTCTCCGTGTACGGCAATGCCGTGAACTACGCGGCCCAGAACATGGTGGTGACCATCAACCGCGGCAAGCAGAACGGCCTGGAACCCGGCCACGTGCTGGCCCTCCTGCGCGAGAGCAACCTCGTCAAGGACACCACCGATTCCGCGCGCCCCAACATCCGCCTGCCCGGCGAGCGCAACGGCCTCATGATGGTGTTCCGCACCTTCGACCGCGTGTCCTATGCCATCGTGCTCGAGATTGACGACGGCGTGCAGGTGGGCGACCGCTTCCTCAACCCCTGA
PROTEIN sequence
Length: 187
VFRNATPLRDPITNEILGYEAQYVGKANVVSNERRREGVDAKGDKVEEIVPAGIDIVAAKEEMRVGDRLLPEPPREFLNFVPRAPQGPQSGHVVSVYGNAVNYAAQNMVVTINRGKQNGLEPGHVLALLRESNLVKDTTDSARPNIRLPGERNGLMMVFRTFDRVSYAIVLEIDDGVQVGDRFLNP*