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scnpilot_p_inoc_scaffold_2410_13

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(11787..12995)

Top 3 Functional Annotations

Value Algorithm Source
general substrate transporters id=5080868 bin=GWF1_Burkholderiales_GWF1_66_17 species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 387.0
  • Bit_score: 557
  • Evalue 8.30e-156
general substrate transporters Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 387.0
  • Bit_score: 557
  • Evalue 1.20e-155
major facilitator superfamily transporter similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 392.0
  • Bit_score: 537
  • Evalue 3.30e-150

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1209
GTGCCGCACACGCCCACCCCGGCACCGCAGGCTGGGCCCGCCCTGCCCCGCGCCATCTGGGTGCTGGGCTTCGTCAGCCTGCTCATGGACATTTCTTCGGAGATGGTCCACAGCCTGCTGCCGATCTTTCTCGTGGGCTCGCTGGGCGTGAGCGTGCTGGTGGTGGGCCTGATAGAGGGCGTGGCCGAATCGACGGCGCTCATCGTCAAGGTCTTCTCTGGCGTGCTGAGCGACCATTTCCGGCGCCGCAAGTGGCTCGCCGTGGTCGGCTACGGCCTGGGCGCACTCACCAAGCCGGCCTTCGCGCTGGCGCAGGGCGCCGGTGTGGTGGTCACGGCGCGTTTCGTCGACCGCATCGGCAAAGGCATACGTGGCGCGCCGCGCGACGCCCTGGTGGCCGACCTGGTGCCGCCCGAACAGCGCGGCGCGGCCTACGGCCTGCGCCAGTCGCTCGACACGGTGGGGGCCTTTGTCGGCCCGCTGCTGGCCACCGTGCTCATGGTCCTGCTGGCCAACGATTTCCGCGCCGTGTTCTGGTTCGCCGTGATCCCGGGCGTGCTCGCCGTGCTGCTGCTCATCGTGGGCGTGCGCGAGCCCGCGCAGCCGCCGGGCACCGCCGGCCGTGGCAGCCCCATCCGGCGCGAGGCCTTGCGGCGGCTCGCCGGCCCCTACTGGAGCGTGGTGATCATCGGCGCGGTCTTCACGCTGGCGCGCTTCAGCGAGGCCTTCCTGGTGCTGCGTGCGCAGCAGCTCGGCGTGGCAGCGTCCCTGGTGCCGCTGGTCATGGTGGCGATGAACGCGATCTATGCCCTCAGCGCGTACCCCTTCGGCAAGCTCTCGGACTCGATGAGCCACACCCGGCTGCTGGCCTGGGGCCTGGCGGTGCTGATGGTCGCCGATGTGGTGCTGGCCTTCGCGCCAGGATGGCCGACCCTGCTGCTGGGCGTGGCGCTGTGGGGTCTGCACATGGGCATGACGCAGGGCCTGCTGGCGGCGATGGTGGCCGACACCGCGCCGGCCGATCTGCGTGGCACGGCCTTTGGCCTGTTCAACCTGATGAGCGGGATCGCGATGCTGCTGGCCAGCGCCATCGCCGGCCTGCTGTGGGAGCAGCTCGGCTCGCAGGCCACTTTCCTGGGCGGCGCCGGCTTCGCGCTGCTGTGTGGCCTGGGCCTGCTGCTGAACCGTCGCCGCCGGCGCCCGGCCTAA
PROTEIN sequence
Length: 403
VPHTPTPAPQAGPALPRAIWVLGFVSLLMDISSEMVHSLLPIFLVGSLGVSVLVVGLIEGVAESTALIVKVFSGVLSDHFRRRKWLAVVGYGLGALTKPAFALAQGAGVVVTARFVDRIGKGIRGAPRDALVADLVPPEQRGAAYGLRQSLDTVGAFVGPLLATVLMVLLANDFRAVFWFAVIPGVLAVLLLIVGVREPAQPPGTAGRGSPIRREALRRLAGPYWSVVIIGAVFTLARFSEAFLVLRAQQLGVAASLVPLVMVAMNAIYALSAYPFGKLSDSMSHTRLLAWGLAVLMVADVVLAFAPGWPTLLLGVALWGLHMGMTQGLLAAMVADTAPADLRGTAFGLFNLMSGIAMLLASAIAGLLWEQLGSQATFLGGAGFALLCGLGLLLNRRRRRPA*