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scnpilot_p_inoc_scaffold_3178_5

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(3834..4265)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding S4 domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHN0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 138.0
  • Bit_score: 254
  • Evalue 7.00e-65
RNA-binding S4 domain-containing protein {ECO:0000313|EMBL:EIK88720.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="H similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 138.0
  • Bit_score: 254
  • Evalue 9.80e-65
RNA-binding s4 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 145.0
  • Bit_score: 203
  • Evalue 3.10e-50

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
ATGACAACACCAACCGAACCCGCGCGCGTGCGCCTGGACAAATGGCTCTGGGCCGCGCGCTTCTTCAAGACCCGCGCGCTCAGCGCCGAGGCGATCGACAAGGGCCGCGTGAGCGTCAACGGCCAGGCGGCCAAGGCCTCGCGCGAGCCGCGCGTGGGCGACACTATCGAGTTCCGCCAGGGCAGCGAGGCGCGCGTGGTGATCGTGCGGGGCCTGAGCGCGGTGCGCGGACCGGCACCCGTGGCGCAGCAGCTCTACGAGGAAACGCCCGAGTCGGTGGCGCGCCGGCTGGCCGCGGCCGAGCAGCGGCGCCTGGCGCCCGAACCGGCATTGAGCCAACCCATGGGACGCCCCACCAAGCGCGACCGGCGCACGCTCAAGGACTGGGGAGACCGCTGGAGCGCGTCGCTCGACGACGACGGCAGCGAATGA
PROTEIN sequence
Length: 144
MTTPTEPARVRLDKWLWAARFFKTRALSAEAIDKGRVSVNGQAAKASREPRVGDTIEFRQGSEARVVIVRGLSAVRGPAPVAQQLYEETPESVARRLAAAEQRRLAPEPALSQPMGRPTKRDRRTLKDWGDRWSASLDDDGSE*