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scnpilot_p_inoc_scaffold_3228_2

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 954..2573

Top 3 Functional Annotations

Value Algorithm Source
Peptide chain release factor 3 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQS4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 539.0
  • Bit_score: 1039
  • Evalue 0.0
  • rbh
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=795665 species="Bacteria; Proteobacteria; Betaprot similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 539.0
  • Bit_score: 1039
  • Evalue 0.0
peptide chain release factor RF-3 similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 539.0
  • Bit_score: 958
  • Evalue 1.00e-276

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1620
ATGTCTGAAATCCAGGACCAGGTGCGCCGGCGCCGCACCTTCGCCATCATTTCCCACCCCGACGCGGGCAAGACCACGCTCACCGAAAAGCTGCTGCTCTTCTCGGGCGCGATCAACATCGCCGGCAGCGTGAAGGCGCGCAAGGCCGCGCGCCACGCCACCAGCGACTGGATGGAGATCGAAAAGCAGCGCGGCATCTCGGTGGCCTCCAGCGTGATGCAGATGGAATACCGCGACTGCGTCATCAACCTGCTGGACACCCCCGGCCACCAGGACTTCTCTGAGGACACCTACCGGGTGCTGACCGCTGTGGACGCGGCGCTGATGGTGATCGACGCGGCCAACGGCGTGGAGCCGCAGACGCGCCGGCTGCTGCAGGTCTGTCGCGCCCGCAACACGCCCATCATCACCTTCGTCAACAAGATGGACCGCGAGGTGCAGCAGCCGCTGGACCTGATGGACGAGATCGAGCGCGAGCTGGGCATGACGGTGGTGCCCTTCACCTGGCCCGTGGGCATGGGCAAGACCTTCCGTGGCGTGTACGACCGCCGCGCCGAGCAGATGCGCGTCTTCGCCGCCGGCGACGACAAGCGCGGCGGCGAGGAAGAGGTGCTGGCCGGCCTGGACAACCCCGAGAGCGCCACGCGCTTCGGCAGCGAGTTCGCCCAGGCCAAGGACGAGCTGGAACTGGTGGCGGGCGCCTCGCCCGCCTTCGACGAGCAGGCCTTCCTGGGCGGGCATCAGACGCCCATGCTGTTCGGCTCGGCCGTCAACAACTTTGGCGTGCGCGAGGTGCTGGACGCGCTGGTGGACCTGGCGCCGCCGCCCGGACCGCGGCCGGCGATCCAGCGCACCGTCGAGCCCGAGGAGCGCAAGTTCAGCGGCGTGGTCTTCAAGATCCAGGCCAACATGGACCCGGCGCACCGCGACCGCATCGCCTTCGTGCGCGTGGCCAGCGGCCACTTCGAGCGCGGCATGCGCCTGAAGGTGGTGCGCAGCGGCAAGGAGCTGCGCCCCAACACGGTGGTGAGCTTCCTGTCGCAGCGCCGCGAGCTGCTCGACGAGGCCTTCGCGGGCGACATCATCGGCATCCCCAACCACGGCGTGCTGCAGCTGGGCGACACCCTGACCGAGGGCGAGGCGCTGCAGTTCACCGGCCTGCCCTTCTTCGCGCCCGAGATCATCCGCAGCGTGGAGGTGGCCGATCCGCTGCGCAGCAAGCAGCTGCGCGCCGGCCTCACCCAGCTTGGCGAGGAAGGCGCGATCCAGGTCTTCCGCCCGGTGGCCGGCAGCGTGCTGCTGCTGGGCGCCGTGGGCCAGCTGCAGTTCGAGGTGGTGGCCCACCGCCTGGAGCACGAGTACGGCGTCAAGGCGCGCATCACCGGCAGCTCGTACAACGTGGCGCGCTGGGTGACCTGCGCGCCCGAGGACGGCGGCGAGCAGGAGCTCAAGCGCTTCATCGACGCCAACGCCCACCGCGTCGCGCTGGACGCGGTGGACGCGCCCACCGTGCTGCTGGACCACATGGCGACGTTGCGCGCGGTCGAGGCCAACTGGCCGAAAATCAGGTTCCACGCCATGCGCGAGCACGCGGGGCTGGTCTTCCACAAGTCCATGTGA
PROTEIN sequence
Length: 540
MSEIQDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAINIAGSVKARKAARHATSDWMEIEKQRGISVASSVMQMEYRDCVINLLDTPGHQDFSEDTYRVLTAVDAALMVIDAANGVEPQTRRLLQVCRARNTPIITFVNKMDREVQQPLDLMDEIERELGMTVVPFTWPVGMGKTFRGVYDRRAEQMRVFAAGDDKRGGEEEVLAGLDNPESATRFGSEFAQAKDELELVAGASPAFDEQAFLGGHQTPMLFGSAVNNFGVREVLDALVDLAPPPGPRPAIQRTVEPEERKFSGVVFKIQANMDPAHRDRIAFVRVASGHFERGMRLKVVRSGKELRPNTVVSFLSQRRELLDEAFAGDIIGIPNHGVLQLGDTLTEGEALQFTGLPFFAPEIIRSVEVADPLRSKQLRAGLTQLGEEGAIQVFRPVAGSVLLLGAVGQLQFEVVAHRLEHEYGVKARITGSSYNVARWVTCAPEDGGEQELKRFIDANAHRVALDAVDAPTVLLDHMATLRAVEANWPKIRFHAMREHAGLVFHKSM*