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scnpilot_p_inoc_scaffold_2507_12

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(11758..12477)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal silencing factor RsfS n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTD6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 241.0
  • Bit_score: 379
  • Evalue 1.80e-102
  • rbh
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrog similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 241.0
  • Bit_score: 379
  • Evalue 2.60e-102
iojap family protein similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 259.0
  • Bit_score: 271
  • Evalue 2.60e-70

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
GACCGCTTCATGACCAGCGAATCCGCCGCGAAGAAAGACATCCAGAAACTGCAAAGGGCCATCGTCGATGGCCTGGAGGACGTCAAGGGCCAGGACATCGTGGTCTTCAACACCGAGGAGCTCTCGCCGCTGTTCGAGCGCGTGATCGTCGCCAGCGGCACCTCCAACCGCCAGACCAAGGCCCTGGCCGCCAGCGTGCGCGACGCGGTGCGCGAAGCCGGCTTCGACAAGCCGCGCATCGAGGGCGAGGAGAACGGCGAATGGATCATCGTGGACTGCGGCCCGGCCGTGGCGCATGTGATGCAGCCCGCCATCCGCCAGTACTACCGGCTCGAAGAGATCTGGGGCGCCAAGCCCGTGCGCCTGACGTCGGCCGCGAAGAAGGCCGCCGCGGCGAAGAAGCCCGCCAAGCCGGCCGCCGAACGCGCCGCCGAGGCCAAGCCGGTGTCGGCCAAGGCCGTGGCGCGCAAGGCCGCGGCCAAGGGCGCGGGCCGCGGCGCCACGCCGGTGGGCAAGGCCGCCCCGGCCAAGAAGGCGCCGGCCAAGAAAGCCGCGCCCGGCCGGGCACCCGCCGCCAAGAAGGCGGCGCCCGCCAAGCCGCGCGCCGGCATGGCCAAGGTGGTGGTCAACGCGCCGGCGGCGAAGAAGAAGGCCTCGCCCAAGGCCGCGCCCTCGGCGGCCCGCAAGCCGGCCAGGCCCGCCGCCAAGAAGAAGGCATGA
PROTEIN sequence
Length: 240
DRFMTSESAAKKDIQKLQRAIVDGLEDVKGQDIVVFNTEELSPLFERVIVASGTSNRQTKALAASVRDAVREAGFDKPRIEGEENGEWIIVDCGPAVAHVMQPAIRQYYRLEEIWGAKPVRLTSAAKKAAAAKKPAKPAAERAAEAKPVSAKAVARKAAAKGAGRGATPVGKAAPAKKAPAKKAAPGRAPAAKKAAPAKPRAGMAKVVVNAPAAKKKASPKAAPSAARKPARPAAKKKA*