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scnpilot_p_inoc_scaffold_2754_14

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 11158..11574

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRC5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 139.0
  • Bit_score: 270
  • Evalue 7.00e-70
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 139.0
  • Bit_score: 270
  • Evalue 9.80e-70
C32 tRNA thiolase similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 139.0
  • Bit_score: 250
  • Evalue 2.80e-64

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGAACATTGAATTGGAAAACCACAAGCTCGAGAAGCGGCTGTGCCGCGAGGTCGGGCGCGCCATCGTCGACTACAACATGATCGAGGAAGGCGACCGCGTCATGGTCTGCCTCTCGGGCGGCAAGGACAGCTACGGCCTGCTCGACATCCTGCTGAAGCTGCAGCAGCGCGCGCCGGTGAAGTTCGAGCTGATCGCGGTCAACCTCGACCAGAAGCAGCCCGGCTTCCCCGAGCACGTGCTGCCCGAGTACCTGACGAAGCTGGGCGTGAAGTTCCACATCGAGAACCAGGACACCTACTCCATCGTCAAGCGCGTGATCCCCGAGGGCAAGACCCTGTGCAGCCTGTGCAGCCGGCTGCGCCGCGGCATCCTCTACCGCGTGGCCGACGAACTCGGCGCCACCAAGATCGCGCTC
PROTEIN sequence
Length: 139
MNIELENHKLEKRLCREVGRAIVDYNMIEEGDRVMVCLSGGKDSYGLLDILLKLQQRAPVKFELIAVNLDQKQPGFPEHVLPEYLTKLGVKFHIENQDTYSIVKRVIPEGKTLCSLCSRLRRGILYRVADELGATKIAL