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scnpilot_p_inoc_scaffold_3320_16

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(14210..14605)

Top 3 Functional Annotations

Value Algorithm Source
RNA recognition motif-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQM2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 133.0
  • Bit_score: 262
  • Evalue 1.80e-67
RNA recognition motif-containing protein {ECO:0000313|EMBL:EIK91512.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="H similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 133.0
  • Bit_score: 262
  • Evalue 2.50e-67
RNA-binding protein with RRM domain similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 148.0
  • Bit_score: 213
  • Evalue 2.70e-53

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGGGCAACAAACTTTATGTCGGCAACCTGCCGTACACGGTGCGCGACGAAGACCTGCAACAGGCCTTCTCGGCTTACGGTGCTGTCAACAGCGCCAAGGTCATGATGGAGCGCGAGACCGGCCGCTCCAAGGGCTTCGGCTTTGTCGAGATGGGCAGCGACGCTGAGGCGCAGTCGGCCATTCAGGGCATGAACGGCCAGTCGCTCGGCGGCCGCAGCCTGGTGGTGAACGAAGCGCGCCCGATGGAGCCGCGTCCCCCGCGCAGCGGTGGCGGCGGCTTCGGCGGCGGCCGTCGCGAAGGCGGCTTCGGTGGTGGCGGCCAGGACGGCGGCTTCCGCAGCCCCTACGGCGGTGGTGGTCGTCGCGACGGCGGCGGTGGCCGCGGCGGCTACTGA
PROTEIN sequence
Length: 132
MGNKLYVGNLPYTVRDEDLQQAFSAYGAVNSAKVMMERETGRSKGFGFVEMGSDAEAQSAIQGMNGQSLGGRSLVVNEARPMEPRPPRSGGGGFGGGRREGGFGGGGQDGGFRSPYGGGGRRDGGGGRGGY*