ggKbase home page

scnpilot_p_inoc_scaffold_4281_5

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(2376..4400)

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRE6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 674.0
  • Bit_score: 1261
  • Evalue 0.0
  • rbh
Lytic transglycosylase catalytic subunit {ECO:0000313|EMBL:EIK91786.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="H similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 674.0
  • Bit_score: 1261
  • Evalue 0.0
lytic transglycosylase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 643.0
  • Bit_score: 733
  • Evalue 5.20e-209

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2025
ATGCAGGGATTTCGCAAGCGCTGGATGGCGCGTTTCGCGGCCCGCCCCATTCCGGGGGCGCGGCTCATTATGGCGGCGCTGCTGCTGCCTTCCATGGCCTGGGCGCAGAACGCCGCGTCCGACCAGACCCTGCTCGCCATGAGCGAGGCCTACCGCCGCGGCCAGTCCGGCGAACTCACGCGCCTGCTGCCCAGCGCGCGCGGCCATGTGCTGGAGCCGCTGGCGCGCTACTGGGAAATGCGCGTGCGGCTGGACAGCGCGCCCGCCCCCGAGATCCGCGCCGCGCTCGACGCCATGGCCGGCACCTACTGGGAGGACCGGCTGCGCAACGACTGGCTGCTGCAGCTCGGCAAGGCGCGCGACTGGGCGCGCTTCGAGACCGAGCGCCCACTGTTCCGCATGAACGACGACCGCCAGGTCACCTGCTACACGGTCATGCTGGACGCCGCCGGCAGCCGGCTGCCGCCCGAGGTGGCGGCCGAGCGCGTGCGCGAGCTCTGGCTGGCACAGCGCGACGCCGAGGACGGCTGCGCCACCGCCGCGCAGGCCCTGCTGGCCAGCGGCCACCTGCGGCCCGCCGTGGCCTGGCAGCGCGCGCGGCTCATGATGGAAGTCGGCCGCGGCCGCGCGGCCAGCCAGGCCGTGGGCCTGGTGCGGCCCGAGGCCGTGCCCACGGTGGACGCCGTCGCGGCCAACCCGGCGAAATACCTCGACGACAAGATCACCGCGATCCGCCCGCGCACCAAGGAGCTGGTCACGCTGGCCATCATCCGCCTGGCCTCGCAGGACCCGGCGGCCGCGGCCAGCGAACTCGACAGCCTGAAGTGGCGCGCCCAGCTCACGGCCGAGGAGCGCGGCTGGCTCTGGGGCGTGATCGGCAAGCGCAGCGCGCAGCGCCTGCAGGCCGAGGCGCTGGGCTACTTCGCGCGCGGCGAGCTGCGCTTCATGACCGACGACCACCTGGCCTGGATGGCGCGCGCCGGCCTGCGCCTGGGCCGCTGGGACGCGGTGCGCGACGCCATCTACGCCATGAGCCCCGCACAGCGCGGCGAAACCGGCTGGACCTATTGGCGCGCGCGCACCATCGAGGCCCTGCAGGACCCCGACGCCGGCGTGGCGCGCGCCCAGGCGCGCGAGATCTACGAGACCATCGCCTCGCCGCGCGACTTCCACGGCATGCTGGCCATGGAGTCGCTGGGCCTGCCCATCGTGGCGCCCGCGCCGCCCGAGCCCCTGACGGCCGAGGAGCGCCGCGCCGCCGAACAGAACCCTGGCCTGCGCCGCGCGCTCGCCGCCATCCGCCTGGGCCTGCGCGGCGAAGGGGTGCGCGAGTGGAACTACCAGATCGCGCTGCACGCGCCCGGCGGCATGGGCGACCGCGAGCTGCTCGCCGCCGCCGACCTGGCCTGCCGCGAACAGCTGTGGGACCGCTGCATCAACACCAGCCAGCGCACCCGCGAGGCCATCGACATGCAGCAGCGCTTTCCCACGCCGCACCGCGAGCAGGTGGTGGCCCGCACGCGCGACATCGGCCTGGACCCGGCCTACGTGTATGGGCTGATCCGCCAGGAAAGCCGCTTCGTGGTGGAGGCACGCTCGCAGGTGGGCGCCTCGGGCCTGATGCAGGTGATGCCGGCCACCGCGCGCTGGACGGCCCGCAAGATCGGCCTGTCCAACTTCCAGCCGCAGCAGATCGGCGAGCGCGACACCAACATCCAGATCGGCACCGCCTACCTCAAGTTCGCGCTCGACGACTTCGAGGGCTCGATGCCGCTGGCCGCGGCCGCCTACAACGCCGGCCCCGGCCGTGCGCGCGCCTGGCGCAACGGCCCCGTGCTGCCCGGCGAGATCTGGGCCGAGAACATCCCCTTCGAGGAAACGCGCGACTACGTGCAGCGCGTGCTCACCAACACCGTCAACTACGCCGCGCTCATGAGCGGCGCGCCGCAGTCGCTGCGCCAGCGGCTGGGCACCGTCGGGCCGCGCAGCGTGGCGGCACCGGCGGAGAACACCGAGTTGCCCTAA
PROTEIN sequence
Length: 675
MQGFRKRWMARFAARPIPGARLIMAALLLPSMAWAQNAASDQTLLAMSEAYRRGQSGELTRLLPSARGHVLEPLARYWEMRVRLDSAPAPEIRAALDAMAGTYWEDRLRNDWLLQLGKARDWARFETERPLFRMNDDRQVTCYTVMLDAAGSRLPPEVAAERVRELWLAQRDAEDGCATAAQALLASGHLRPAVAWQRARLMMEVGRGRAASQAVGLVRPEAVPTVDAVAANPAKYLDDKITAIRPRTKELVTLAIIRLASQDPAAAASELDSLKWRAQLTAEERGWLWGVIGKRSAQRLQAEALGYFARGELRFMTDDHLAWMARAGLRLGRWDAVRDAIYAMSPAQRGETGWTYWRARTIEALQDPDAGVARAQAREIYETIASPRDFHGMLAMESLGLPIVAPAPPEPLTAEERRAAEQNPGLRRALAAIRLGLRGEGVREWNYQIALHAPGGMGDRELLAAADLACREQLWDRCINTSQRTREAIDMQQRFPTPHREQVVARTRDIGLDPAYVYGLIRQESRFVVEARSQVGASGLMQVMPATARWTARKIGLSNFQPQQIGERDTNIQIGTAYLKFALDDFEGSMPLAAAAYNAGPGRARAWRNGPVLPGEIWAENIPFEETRDYVQRVLTNTVNYAALMSGAPQSLRQRLGTVGPRSVAAPAENTELP*