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scnpilot_p_inoc_scaffold_4115_6

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 6011..6829

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00037BFD9B similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 254.0
  • Bit_score: 326
  • Evalue 2.80e-86
  • rbh
transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 257.0
  • Bit_score: 322
  • Evalue 1.10e-85
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AGU53773.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 257.0
  • Bit_score: 322
  • Evalue 5.60e-85

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGTTCCTGTCCTCGTCCCAGACCAAAGCCCTGTCCCAGGTGATGTGCCTCACGGCCGAAGCCACGGACGCCGATCTGCTGCGCGAGCAACTGGCGCTGCCCATGCTGTCGCTGCTGAACGCCGACACCTACGTGTCGATGGCCTGGAACACCGGCATGCGCCGCTTCGAGCGCGCCAAGGCCTTGAACATGTCGCTGGAGCACCTGCGTTCCTGGGACGACTACTACCGCTTCATCGACCCGCTGACCCAGCCCATGATGCAGCGGCGCCGCCCCACGGTGGCCACGCAGGTGATGCCGCAGTCCGAGCTCTCGCGCACCGAGTTCTTCAACGACTTCCTGCAGCGCGACCGCATGCACTGGGGCGTGAACGTCTACTTCCACGCGGGCGACACCTGCGTGGGCGATTTCCGCATCTGGCGCCACAAGGACCGCGGCAATTTCACCAGCCACGAGATCGAGGCGCTGCGGCTGGTGGAGCCGGCGGTGACGGCCGCGCTGGCGCGCACGCGCGGCGAGGCCTCCGAGGCGCCCGCGCCGCGCGTGGCCGATCAGGTGGAGCGCCTGATGCGCCAGCCCGCGCAGCTGAGCCGGCGCGAGGCCGAGGTGGCCTGGCTGGTGAGCAGCGGCTGCCCCGACAAGGAGATCGCGCGCCAGCTCAAGGTGCAGTTCCCCACCGTGCGTTACCACCTGGGCAACGCCTTTCGCAAGCTGCAGGCCGACAACCGCGCCGGCCTGGCCGCGCGCGTGCAGTGCCTGCTGGACGGCGACCCGCTCGCGCACGCGGCCTGGGAGCCGCGCGGTGTGCCGCTGGGCTGA
PROTEIN sequence
Length: 273
MFLSSSQTKALSQVMCLTAEATDADLLREQLALPMLSLLNADTYVSMAWNTGMRRFERAKALNMSLEHLRSWDDYYRFIDPLTQPMMQRRRPTVATQVMPQSELSRTEFFNDFLQRDRMHWGVNVYFHAGDTCVGDFRIWRHKDRGNFTSHEIEALRLVEPAVTAALARTRGEASEAPAPRVADQVERLMRQPAQLSRREAEVAWLVSSGCPDKEIARQLKVQFPTVRYHLGNAFRKLQADNRAGLAARVQCLLDGDPLAHAAWEPRGVPLG*