ggKbase home page

scnpilot_p_inoc_scaffold_4157_7

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 7476..8117

Top 3 Functional Annotations

Value Algorithm Source
two component LuxR family transcriptional regulator id=5080956 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 212.0
  • Bit_score: 288
  • Evalue 5.00e-75
two component LuxR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 212.0
  • Bit_score: 287
  • Evalue 2.00e-74
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 212.0
  • Bit_score: 256
  • Evalue 5.90e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGAGCGACATCTACCTGGTTGACGACCACGCCATGCTGCGTGACGGCCTGAAGGCCGTGCTGGAGGACGCCGGCCACCGCGTGGTGGGCGAGTCCGCCGACCCCACGGCGGCCCTGGCCGAGATCGTTCGCCTGGCGCCGTCGGTGGTGCTGCTGGACCTGCACCTCGGCCTGCGCTCGGGCTTCGAGCTGCTGGAGCAGCTGGTGCAGCGCAAGGCCCCGTCGCGCGTGGTCATGCTCACCATGTCGGCCCAGCCGCGCCACGTGGCCGAGGCCATGCGCCTTGGCGCTTTCGGCTACGTGCTCAAGGGCTCGCCCGCGCGCGAGGTGCTGGAGGCGGTGGAGGCCGTGGCCGGCGGCCGCAAGCACCTGGGCGGGCCGGTGGCGCAGCTGGCCGTGGAGGGGCTCACGCAGGCGGACGACAACAACCCCCTGGCCGCGCTGTCGGTGCGCGAGCGCCAGGTGATCCAGCTGGTGGTGCAGGGCCACACCAGCGCGGCCATCGGCGAGCAGCTGCACCTGTCGCCCAAGACGGTGGAGAGCTACCGCAGCCGGCTCATGGCCAAGCTCGGCGTGAGCGACCTGCCCGCGCTGGTGCGGCTGGCGATCCGCGAGGGCCTGATCAGCGCCGACGACCTCTGA
PROTEIN sequence
Length: 214
MSDIYLVDDHAMLRDGLKAVLEDAGHRVVGESADPTAALAEIVRLAPSVVLLDLHLGLRSGFELLEQLVQRKAPSRVVMLTMSAQPRHVAEAMRLGAFGYVLKGSPAREVLEAVEAVAGGRKHLGGPVAQLAVEGLTQADDNNPLAALSVRERQVIQLVVQGHTSAAIGEQLHLSPKTVESYRSRLMAKLGVSDLPALVRLAIREGLISADDL*