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scnpilot_p_inoc_scaffold_6154_2

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(1132..1656)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 137.0
  • Bit_score: 222
  • Evalue 5.00e-55
Ribonuclease VapC n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGJ3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 137.0
  • Bit_score: 222
  • Evalue 3.60e-55
PilT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 127.0
  • Bit_score: 145
  • Evalue 1.20e-32

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGACGCGGTCTGACCCAGAAACGCCAGGGAGCCGGCTGTGCCGGTCCGTCGGCGTTGCCCCCTCGGAGGGGTCGCGCGAGGCGCGGCAGGGGGGGGCTCTTGCTCTGGTCGTCATCGACACCAACGTCGTGCTCGACCTGTTCGTCTTCGACGACCCCGCCGTGGCGCCGCTGCGCGCCGCGCTGGTGCAGGGCCGCGTGGCCTGGATCGCCAGCGAGGCCATGCGCGAGGAGCTGCGGCGCGTGCTGGACTATCCGCACCTCGCGCGCCGCCTGGACGGTGGCGGGCCCGATGCCGTGCTGGCCGCGTTCGACCGCCACGCGCGGCGCGTGGCGCCTGCCGCCAAGGCCGCGTTCACCTGTCGCGACCCCGACGACCAGCGCTTCATCGACCTGGCCGTGGCGCATGGCGCCGCGCTGCTCAGCAAGGACGCCCATGTGCTGGCGCTGGCGCGCCGCCTCGCGGGCATCGGCGTGCCCGTGCGCCGCGCCTGGGCGCCGAGCGCTGAGGGGGCCGTGGCGTGA
PROTEIN sequence
Length: 175
MTRSDPETPGSRLCRSVGVAPSEGSREARQGGALALVVIDTNVVLDLFVFDDPAVAPLRAALVQGRVAWIASEAMREELRRVLDYPHLARRLDGGGPDAVLAAFDRHARRVAPAAKAAFTCRDPDDQRFIDLAVAHGAALLSKDAHVLALARRLAGIGVPVRRAWAPSAEGAVA*