ggKbase home page
Advanced Search
Search Help

scnpilot_p_inoc_scaffold_5427_1

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 1..4023

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 999.99
  • Bit_score: 2570
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 999.99
  • Bit_score: 2397
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSN8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 999.99
  • Bit_score: 2570
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4023
CCCATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTGAAGCACCGTGGCGTGATCTGCGAGAAGTGCGGCGTCGAAGTGACCCAGACCAAGGTGCGCCGCGAGCGCATGGGCCACATCGACCTGGCCGCGCCCTGCGCGCACATCTGGTTCCTGAAGTCGCTGCCGTCGCGCCTGGGCCTGGTGCTCGACATGACGCTGCGCGACATCGAGCGCGTGCTGTACTTCGAGGCCTACGTGGTGACCGACCCCGGCATGACCCCGCTGAAGAAGTTCGGCATCATGTCCGAGGACGACTTCGACGCCAAGCGCAAGGAGTACGGTGACGAGTTCGTCGCCAAGATGGGCGCCGAGGGCATCAAGGAGCTGCTGGAGAACATCGACCTCGACATCGAGATCGAGAAGCTGCGCAACGACCTGACCGGCTCGGAACTCAAGATCAAGAAGAACGCCAAGCGCCTGAAGGTGCTCGAGGCCTTCAAGCGCTCGGGCATCAAGCCCGAGTGGATGGTGCTCGACGTGCTGCCCGTGCTGCCGCCGGACCTGCGTCCGCTGGTGCCGCTGGACGGCGGCCGCTTCGCGACCTCCGACCTCAACGACCTGTACCGCCGCGTCATCAACCGCAACAGCCGCCTCAAGCGCCTGCTCGAACTCAAGGCGCCCGAGATCATCGCGCGCAACGAGAAGCGCATGCTGCAGGAAGCCGTGGACAGCCTGCTGGACAACGGCCGCCGCGGCAAGGCCATGACGGGCGCCAACAAGCGCGCGCTCAAGTCCCTGGCCGACATGATCAAGGGCAAGAGCGGCCGCTTCCGCCAGAACCTGCTGGGCAAGCGCGTCGACTACTCGGGCCGTTCGGTCATCGTGGTGGGTCCGACGCTCAAGCTGCACCAGTGCGGCCTGCCCAAGCTGATGGCGCTGGAGCTGTTCAAGCCCTTCATCTTCTCGCGCCTGGAAGCCATGGGCATCGCGACCACCATCAAGGCCGCGAAGAAGGAAGTGGAAGCCGGCACCCCCGTGGTGTGGGACATCCTCGAAGAGGTCATCAAGGAGCACCCGGTTCTGCTGAACCGCGCGCCCACGCTGCACCGCCTGGGCATCCAGGCCTTCGAGCCCATCCTGATCGAGGGCAAGGCGATCCAGCTGCACCCGCTGGTCTGCGCGGCCTTCAACGCCGACTTCGACGGTGACCAGATGGCCGTTCACGTGCCGCTGTCCGTGGAAGCCCAGCTGGAAGCCCGCACCCTGATGCTGGCCTCCAACAACGTGCTGTTCCCGGCCAACGGCGAACCCTCCATCGTGCCCTCGCAGGACGTGGTGCTGGGCCTGTACTACGCCACGCGCGAGAAGATCAACGGCAAGGGCGAAGGCATGATCTTCGCGGACCTGCCCGAGCTGCAGCGCGCGCTGGACAACGGCGTGGTGGAACTCACCGCGCGCGTGAGCGTGCGCCTGGTCGAGTGGACCAAGGACAAGGCCAGCGGCGAGTTCGTCGCGGGCCTCAAGCTGGTCGACACCACCGTGGGCCGCGCGCTGCTGTCCGAGATCCTGCCCAAGGGCCTGCCCTTTTCGGTGCTGGACAAGCCGCTCAAGAAGAAGGAAATCTCGCGCCTCATCAACGCGAGCTTCCGCAAGTGCGGCCTGAAGGAGACCGTGGTCTTCGCCGACAAGCTGCTGCAGAACGGCTTCCGCCTGGCCACGCGCGCGGGCATCTCGATCGCCGTCGACGACATGCTGGTGCCCAAGGAGAAGAGCGGCATCATCGAGCGCGCCGAGTCCGAGGTGAAGGAGATCGCCCAGCAGTACGCCTCCGGTCTGGTGACCGCCGGCGAGCGCTACAACAAGGTGGTCGACATCTGGGGCAAGGCCGGTGACGAGATCTCCAAGGTCATGATGGCCCAGCTGGCCAAGCAGAAGACCACGGACCGCAGCGGCAAGGAAGTGGACCAGGAGTCGTTCAACTCCATCTACATGATGGCCGACTCGGGCGCCCGCGGTTCCGCGGCGCAGATCCGCCAGCTGGCCGGCATGCGCGGCCTGATGGCCAAGCCCGACGGCTCCATCATCGAGACCCCCATCACGGCGAACTTCCGTGAAGGCCTCAACGTGCTGCAGTACTTCATCTCCACGCACGGCGCCCGCAAGGGCCTGGCCGACACGGCGCTGAAGACCGCGAACTCGGGTTACCTGACGCGCCGCCTGGTGGACGTGACGCAGGACCTGGTGGTCACCCACCAGGACTGCGGCACCTCCAACGGCACGCTGATGCGCGCCATCGTCGAGGGCGGTGAGGTCATCGAGTCGCTGCGCGACCGCATCCTGGGCCGCACCACGGCCGAGGAAGTGATCCATCCCGAGACGCGCCAGCAGCTCGTGCCCGCGGGCGAAATGCTCGACGAGGACACCCTCGACCTGCTCGAGGCCGCCGGCGTCGACGAGGTCAAGGTGCGCACCGCGCTCACCTGCGAGACCCGCTACGGCCTGTGCGCCAAGTGCTACGGCCGCGACCTCGGCCGCGGTGGCCTGGCCAACATCGGTGAGGCGGTGGGCGTGATCGCCGCGCAGTCGATCGGCGAGCCCGGCACGCAGCTGACCATGCGCACCTTCCACATCGGCGGCGCGGCCTCGCGCGCGGCGGTGGCCTCCAGCGTGGAAGCCAAGTCCAGCGGCGTGATCGGCTTCAACGCCACCATGCGCTACGTGACCAACTCCAAGGGCGAGCTGGTGGTGATCGCGCGTTCGGGCGAGATCATCATCCAGGACGAACACGGCCGCGAGCGCGAGCGCCACAAGGTGCCCTACGGCGCCATCCTGGCGATCAAGCCCGACCAGCAGATCAAGGCCGGCACCATCCTGGCCAACTGGGACCCGCTGACCCGACCCATCATCACGGAATTCGCCGGCACGGTGAAGTTCGAAAACGTGGAAGAGGGCCTCACGGTCGCCAAGCAGGTCGACGACGTGACCGGTCTGTCCACGCTGGTGGTGATCGATCCCAAGCGCCGCGGCGCCACGAAAGTGGTGCGCCCGCAGGTCAAGCTGATCGACGCGTCCGGCAGCGAGGTGAAGATCCCCGGCACCGACCACGCCGTGACCATCGGCTTCCAGGTCGGCGCCCTGATCCAGGTGCGCGATGGCCAGGACGTGGGCCCCGGCGAGGTGCTGGCCCGCATCCCGGTCGAAGGCCAGAAGACCCGCGACATCACGGGTGGTCTGCCGCGCGTGGCCGAGCTGTTCGAGGCGCGTTCGCCCAAGGACGCCGGCATCCTCGCCGAGATGACCGGTACCGTGTCCTTCGGCAAGGAGACCAAGGGCAAGATCCGCCTGCAGATCACCGACCCCGAGGGCAAGGTCTGGGAAGAGCTCATCCCGAAAGAGAAGAACATCCTGGTGCACGAAGGCCAGGTGGTCAACAAGGGCGAGAGCATCGTCGACGGCCCGGCCGACCCGCAGGACATCCTGCGCCTGCTGGGCATGGAAGAGCTCGCGCGCTACATCGTCGATGAGGTGCAGGACGTCTACCGACTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCGTTCGCCAGATGCTGCGCCGCGTCGTGGTCGAGAACCCCGGCGATTCGTCCTACATCGGCGGCGAGCAGGTGGAGCGCTCGGAGATCCTCAACACCAACGACGCCCTGCGCGCCGACGGCAAGATCCCCGCGACCTACAGCAACGTGCTGCTCGGTATCACCAAGGCCTCGCTGTCGACCGACTCGTTCATCTCCGCGGCCTCCTTCCAGGAGACCACGCGCGTGCTGACCGAAGCGGCCATCATGGGCAAGCGCGACGAGCTGCGTGGCCTCAAGGAGAACGTCATCGTCGGCCGCCTGATCCCCGCGGGCACCGGCATGGCCTACCACGAGGCGCGCAAGGTCAAGGAGAAGATGGACGACGAAGAGCGCCGCGCCATCGCCGAGGCCGACGCCCTGTCGCTGGCGGCCGACCAGGCCGACGCGGCGGCTGGCGAGTCCGCCGAGTAA
PROTEIN sequence
Length: 1341
PIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSLPSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFGIMSEDDFDAKRKEYGDEFVAKMGAEGIKELLENIDLDIEIEKLRNDLTGSELKIKKNAKRLKVLEAFKRSGIKPEWMVLDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLKRLLELKAPEIIARNEKRMLQEAVDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVEAGTPVVWDILEEVIKEHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQLEARTLMLASNNVLFPANGEPSIVPSQDVVLGLYYATREKINGKGEGMIFADLPELQRALDNGVVELTARVSVRLVEWTKDKASGEFVAGLKLVDTTVGRALLSEILPKGLPFSVLDKPLKKKEISRLINASFRKCGLKETVVFADKLLQNGFRLATRAGISIAVDDMLVPKEKSGIIERAESEVKEIAQQYASGLVTAGERYNKVVDIWGKAGDEISKVMMAQLAKQKTTDRSGKEVDQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTHQDCGTSNGTLMRAIVEGGEVIESLRDRILGRTTAEEVIHPETRQQLVPAGEMLDEDTLDLLEAAGVDEVKVRTALTCETRYGLCAKCYGRDLGRGGLANIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSSGVIGFNATMRYVTNSKGELVVIARSGEIIIQDEHGRERERHKVPYGAILAIKPDQQIKAGTILANWDPLTRPIITEFAGTVKFENVEEGLTVAKQVDDVTGLSTLVVIDPKRRGATKVVRPQVKLIDASGSEVKIPGTDHAVTIGFQVGALIQVRDGQDVGPGEVLARIPVEGQKTRDITGGLPRVAELFEARSPKDAGILAEMTGTVSFGKETKGKIRLQITDPEGKVWEELIPKEKNILVHEGQVVNKGESIVDGPADPQDILRLLGMEELARYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRRVVVENPGDSSYIGGEQVERSEILNTNDALRADGKIPATYSNVLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGMAYHEARKVKEKMDDEERRAIAEADALSLAADQADAAAGESAE*