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scnpilot_p_inoc_scaffold_6331_1

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(3..740)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSU1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 246.0
  • Bit_score: 449
  • Evalue 2.50e-123
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EIK92281.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydr similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 246.0
  • Bit_score: 449
  • Evalue 3.60e-123
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 250.0
  • Bit_score: 337
  • Evalue 3.00e-90

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGGAACTGAGGCAACTGCGCTACTTCGTCCGCATCGTCGAGCTCGGCGCCATGAGCCGCGCGGCGGCGGAACTCGACATGGTCCAGTCCGCGCTGAGCCAGCAGATCAGCCGGCTGGAAAGCGAGCTCAGCACGCGTCTGCTGCAGCGCACGCCGCGCGGCGTGTTGCCCACCGAGGCCGGCATGGCCTTCTTCCGCGAGGCCAAGCTCACCCTGCGCCACGCCGAGCAGGCCGCGCGCGCCGCGCAGGCCGCGCGCCTGTCGGGCTCCGTCAGCGTGGGCCTGGCGCCCACCACGGCGGCCGTGCTGGGCCTGCCGCTGATGCAGGCCATGCGCGAGCGCTACCCCGACGTGCGCCTGCACCTGGTGGAGGGCATGTCCGGCCATCTCGCGGCCCAGCTCAAAGCGCGCGAGCTCGACCTCGCCGTGCTGTTCGATCCGCGCGCGGGACAAGGTGGCCCCGTGCCGGGGGACCGCTTGATGGACCGCCAGCCCCTGTTCACCGAGGACATCTTCCTCGTCACGCAGGCCAGGCGGCGGCGACGCAAGCGCCTGGCGCTCGCCGACCTCGGCGACGAGCCCCTGATCCTGCCCACGCACCCGCACGGCCTTCGCCTGACGCTCGACGCCGCCTTCGCGCGTGCCGGCATCCGCCCCCAGGTGGTGATGGAGGTGGACTCCTTGTCCATGGTGATGGCCGCCGTGGACGCCGGCCTGGGCAGCAGCCTGCAGCCCTAC
PROTEIN sequence
Length: 246
MELRQLRYFVRIVELGAMSRAAAELDMVQSALSQQISRLESELSTRLLQRTPRGVLPTEAGMAFFREAKLTLRHAEQAARAAQAARLSGSVSVGLAPTTAAVLGLPLMQAMRERYPDVRLHLVEGMSGHLAAQLKARELDLAVLFDPRAGQGGPVPGDRLMDRQPLFTEDIFLVTQARRRRRKRLALADLGDEPLILPTHPHGLRLTLDAAFARAGIRPQVVMEVDSLSMVMAAVDAGLGSSLQPY