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scnpilot_p_inoc_scaffold_6601_5

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 2669..3463

Top 3 Functional Annotations

Value Algorithm Source
Rna polymerase sigma factor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJU9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 264.0
  • Bit_score: 423
  • Evalue 1.20e-115
  • rbh
Rna polymerase sigma factor {ECO:0000313|EMBL:EIK89489.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 264.0
  • Bit_score: 422
  • Evalue 5.00e-115
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 263.0
  • Bit_score: 291
  • Evalue 2.10e-76

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
GTGACAACTCCGGCCGACTCCCACCCCCTGATCGACGATGAAGCGCTGCGCCACCGCCTGGTCGCGCTGGCGCGGCACTGGCTGGCGCACGGCGATGAGGCCGAAGACCTGGTGCAGGACACCTGGCTGCGCACGGCGCAGGGCGGCCTACCACCCGATGCCAGTGGCCGGGAGGCCTGGCTGGTCACCGTGTTGCGCCACCTGTGCATCGACGCCTGGCGGCGGCGTCAGCGATACCACGCCCTGCTGGAGCAAGCGGGTGACCACGGCGCGACAGCCGTCGAGAGCGAAGCGCCACAGGCACTGGCCGAACAGGCGCAACGGGTCGAGCAGGCCTTGCGGCATGTGGTCCACACCTTGGCGGCAGCCGATGCCGCGGCCGTCCTGCTGGTCGAGGTATTCGACTTCAGCCACGCCGAGCTGGGGCGCCTGACCGGGCGCAGCGAGGCGGCCTCGCGCCAGCAACTGCACCGCCTGTTGCAGCGCTTGCGCCGGCCGGCGGCGCCGGCGCGGCCCTCGGACGAGGACACCGACTGCCTGCTGGCCCTGTGCCAGTGGGCGCTGGCGCAGCGCGATCCAGCGGGGCTGGTCGCCGTGTTGCAGGTGTCGAGTCCCCGGGCGATGGCCGCGTCAGCCCCCTTCGCCCATGCCGGGGCGCGCGAGGCCGCAGCGCCTGCGCCGGCGCCGATCGCGCGCCTCGTGCAGTTCGGCGACTTCCTGGCCTTGCAGGTCCGCACACCGGCCGGGCTGCTGGCCTGTCTGCCGCTGGGTGAGGCGGTCCGCGAGACGGTCTGA
PROTEIN sequence
Length: 265
VTTPADSHPLIDDEALRHRLVALARHWLAHGDEAEDLVQDTWLRTAQGGLPPDASGREAWLVTVLRHLCIDAWRRRQRYHALLEQAGDHGATAVESEAPQALAEQAQRVEQALRHVVHTLAAADAAAVLLVEVFDFSHAELGRLTGRSEAASRQQLHRLLQRLRRPAAPARPSDEDTDCLLALCQWALAQRDPAGLVAVLQVSSPRAMAASAPFAHAGAREAAAPAPAPIARLVQFGDFLALQVRTPAGLLACLPLGEAVRETV*