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scnpilot_p_inoc_scaffold_6062_4

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(2710..3693)

Top 3 Functional Annotations

Value Algorithm Source
Extra-cytoplasmic solute receptor protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKP0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 327.0
  • Bit_score: 607
  • Evalue 5.70e-171
  • rbh
Extra-cytoplasmic solute receptor protein {ECO:0000313|EMBL:EIK89780.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 327.0
  • Bit_score: 607
  • Evalue 8.00e-171
Tricarboxylate transport protein TctC similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 321.0
  • Bit_score: 303
  • Evalue 6.50e-80

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGACACCCACGATCCCGCGCCGCCTGGCAGCGCTGGCGCTGCTCGGCGCCGGCCTCGCGCTCTCCAGCCCCTTTGCCCTGGCCAGCGACCCCTGGCCGAGCAAGGCCATCCGCATCGTCGTGCCCTACGCGCCGGGCGGCATCGGCGACATCGTCGCCCGCATGATCCAGCCCGTCCTGCAGGACGAGCTCAAGCAGCCGGTGATCATCGAGAACAAGCCGGGCGCCGCCGGCAGCCTGGGCACCGAGTTCGTGGCCAAGGCCCCGCCCGATGGCTACACCCTGCTACTGGCGCTGGCCGCGCCCCAGACCCTGAACCAGTACATCTTCAAGGTCGGCTACGACGGCGTGAAGGACTTCGCGCCCATCACGCTCATCAACACCAACCCCCTGGTGCTGATGGTCAACCCCTCGCTGCCGGTGACCAACCTCAAGGAGTTCATCGCCTACGCCAAGGCCAACCCGGGCAAGCTCAACTTCGGCGGCGCCGGCGGGCTCACGCAGTTCGCGGGCGAGATCCTGAAGCACCAGGTGGGCATCAACATGGTCCACGTGCCCTACCGCGGCGGCGCGCCCGCCGTGGCGGCGGCCGCGGCCGGCGACGTGCACCTGAGCTTCGCCAACTACTCCGACGCCTTGACCTGGATGCAATCGGGCAAGCTGCGCGCCATCGCGCTGACCACGGCGCGCCGCTACCCGCAGACGCCCGACATCCCCACCATCGCCGAATCGGGCGTGCCCGGCTTCGACGTCACCGGCTGGAGCGGTTTGTTCGCGCCGGCCGGCACGCCACCCGCCATCGTCGAGCGCATCGCCAACGTGCTGCGCCCGGCCCTGCAGACGCCGGCCATGCGCAAGCGCATGGAAACCGTGGGCGCCGAGCCCGGCGGCAACTCGCCCGCCGAGTTCGCCAAGCAGGTGGCGGACGACGCGCGCAAGTGGTCGGAGTTCGTCAAGACCAGCGGCATCCAGGTCACCCAGTAA
PROTEIN sequence
Length: 328
MTPTIPRRLAALALLGAGLALSSPFALASDPWPSKAIRIVVPYAPGGIGDIVARMIQPVLQDELKQPVIIENKPGAAGSLGTEFVAKAPPDGYTLLLALAAPQTLNQYIFKVGYDGVKDFAPITLINTNPLVLMVNPSLPVTNLKEFIAYAKANPGKLNFGGAGGLTQFAGEILKHQVGINMVHVPYRGGAPAVAAAAAGDVHLSFANYSDALTWMQSGKLRAIALTTARRYPQTPDIPTIAESGVPGFDVTGWSGLFAPAGTPPAIVERIANVLRPALQTPAMRKRMETVGAEPGGNSPAEFAKQVADDARKWSEFVKTSGIQVTQ*